RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 HEY2Q9UBP5 337 aa15.85■□□□□ 0.13
LMNB1-203ENST00000460265 ABT1Q9ULW3 272 aaKnown RBP15.85■□□□□ 0.13
LMNB1-203ENST00000460265 ZNF510Q9Y2H8 683 aa15.85■□□□□ 0.13
LMNB1-203ENST00000460265 COMMD3-BMI1R4GMX3 469 aa15.85■□□□□ 0.13
LMNB1-203ENST00000460265 TCRBV5S1A1TA0A578 114 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 ADCY6O43306 1168 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 LYNP07948 512 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SCNN1GP51170 649 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SLC34A1Q06495 639 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 LIN52Q52LA3 116 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 C16orf46Q6P387 395 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 RFWD3Q6PCD5 774 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 ARID3BQ8IVW6 561 aaPredicted RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SNX27Q96L92 541 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 MAF1Q9H063 256 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 CHKBQ9Y259 395 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 PRRC2BQ5JSZ5 2229 aaKnown RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 DOCK1Q14185 1865 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 H3BRJ5 948 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 ZWINTO95229 277 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 TPH1P17752 444 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 PTPN1P18031 435 aaKnown RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SH3BGRP55822 239 aaPredicted RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 LILRA4P59901 499 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 TAF1BQ53T94 588 aaPredicted RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 LDLRAD1Q5T700 205 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 TRMT10BQ6PF06 316 aaKnown RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 OLFML1Q6UWY5 402 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 ARMCX6Q7L4S7 300 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SLC26A11Q86WA9 606 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 TSPYL2Q9H2G4 693 aaPredicted RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SLC17A6Q9P2U8 582 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 INHBCP55103 352 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 OCRLQ01968 901 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SOX4Q06945 474 aaPredicted RBP15.84■□□□□ 0.13
LMNB1-203ENST00000460265 FAM187BQ17R55 369 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 RAPH1Q70E73 1250 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 HTR3CQ8WXA8 447 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 PLEKHA5Q9HAU0 1116 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 SLC4A7Q9Y6M7 1214 aa15.84■□□□□ 0.13
LMNB1-203ENST00000460265 TNS1Q9HBL0 1735 aaKnown RBP15.83■□□□□ 0.13
LMNB1-203ENST00000460265 C3orf70A6NLC5 250 aaPredicted RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 DFFAO00273 331 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 THP07101 528 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ZFXP17010 805 aaPredicted RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 TYK2P29597 1187 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 CDC42EP1Q00587 391 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 CHI3L2Q15782 390 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 FAM110CQ1W6H9 321 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 MFSD4BQ5TF39 518 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 SPRYD7Q5W111 196 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 OTOAQ7RTW8 1153 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ST13P4Q8IZP2 240 aaPredicted RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 SLC35F5Q8WV83 523 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 PPP1R36Q96LQ0 422 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 PGLYRP2Q96PD5 576 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 CSPG4P5Q96PW8 444 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ZNF184Q99676 751 aaPredicted RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 LGALS13Q9UHV8 139 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 EFR3BQ9Y2G0 817 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ZNF711Q9Y462 761 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ASMTLO95671 621 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ESRRAP11474 423 aaPredicted RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 IGFBP6P24592 240 aaPredicted RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 MGAT1P26572 445 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 PTPN4P29074 926 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ACADSBP45954 432 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 CCDC15Q0P6D6 951 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 MAP2K5Q13163 448 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 CBX3Q13185 183 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 OLIG2Q13516 323 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 MOGSQ13724 837 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 NT5DC4Q86YG4 428 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 MPP5Q8N3R9 675 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ANKLE1Q8NAG6 615 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 GATA6Q92908 595 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 MPP4Q96JB8 637 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 SRPK1Q96SB4 655 aaKnown RBP15.83■□□□□ 0.12
LMNB1-203ENST00000460265 PTPN18Q99952 460 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 PRDM12Q9H4Q4 367 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 ARMCX1Q9P291 453 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 SNX10Q9Y5X0 201 aa15.83■□□□□ 0.12
LMNB1-203ENST00000460265 RNF103O00237 685 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 BAG2O95816 211 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 TTC39BQ5VTQ0 682 aaPredicted RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 SYPL2Q5VXT5 272 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 C4orf50Q6ZRC1 276 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 PDZD4Q76G19 769 aaPredicted RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 SPATA24Q86W54 205 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 SERAC1Q96JX3 654 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 FRMD8P1Q9BZ68 369 aaPredicted RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 ZNFX1Q9P2E3 1918 aaKnown RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 CXorf49A8MYA2 514 aaPredicted RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 TPD52L2O43399 206 aaKnown RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 PNPLA4P41247 253 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 AFF1P51825 1210 aaKnown RBP15.82■□□□□ 0.12
LMNB1-203ENST00000460265 KDSRQ06136 332 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 LSAMPQ13449 338 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 ARL13BQ3SXY8 428 aa15.82■□□□□ 0.12
LMNB1-203ENST00000460265 PQLC3Q8N755 202 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms