RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CDH5P33151 784 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 KRT9P35527 623 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 WASP42768 502 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 PTGER3P43115 390 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 COPAP53621 1224 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 SHC2P98077 582 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CDK17Q00537 523 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 HNRNPDQ14103 355 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 ARHGAP44Q17R89 818 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 DPCR1Q3MIW9 517 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 TRIM61Q5EBN2 209 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 MS4A13Q5J8X5 152 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 MIIPQ5JXC2 388 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 TMEM215Q68D42 235 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CHST9Q7L1S5 443 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 SLC26A9Q7LBE3 791 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 ARCQ7LC44 396 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 ADIPOR2Q86V24 386 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 TMPRSS6Q8IU80 811 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 OR2T3Q8NH03 318 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 ENOX1Q8TC92 643 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CLEC4CQ8WTT0 213 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 SIPA1Q96FS4 1042 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 PPP1R13BQ96KQ4 1090 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 LMLNQ96KR4 655 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 GBP4Q96PP9 640 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 NUP58Q9BVL2 599 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CIPCQ9C0C6 399 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 MKRN2Q9H000 416 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CAPN10Q9HC96 672 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 OSGEPQ9NPF4 335 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 PLCB1Q9NQ66 1216 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 ABCB8Q9NUT2 735 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CYTH4Q9UIA0 394 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 DNAJC12Q9UKB3 198 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 TPX2Q9ULW0 747 aaKnown RBP10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CLEC4EQ9ULY5 219 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CYP8B1Q9UNU6 501 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 NAALADL1Q9UQQ1 740 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 PAXBP1Q9Y5B6 917 aa10.38□□□□□ -0.75
HDLBP-228ENST00000459788 CHD5Q8TDI0 1954 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 KCNU1A8MYU2 1149 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 KCNJ18B7U540 433 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 WASH3PC4AMC7 463 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 GOLGA6L22H0YM25 854 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 CDX4O14627 284 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 TSPAN3O60637 253 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 TBL1XO60907 577 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 KCNK5O95279 499 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 LSM8O95777 96 aaKnown RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 EPHX1P07099 455 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 ACADMP11310 421 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 SLC6A4P31645 630 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 CCR1P32246 355 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 CLCN1P35523 988 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 USP8P40818 1118 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 GABRB2P47870 512 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 TPMTP51580 245 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 PLK1P53350 603 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 IRX4P78413 519 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 GFPT1Q06210 699 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 SULT2A1Q06520 285 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 SLC14A1Q13336 389 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 KCNJ12Q14500 433 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 CCDC6Q16204 474 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 PTPRNQ16849 979 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 FNDC3BQ53EP0 1204 aaKnown RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 MBLAC2Q68D91 279 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 NADSYN1Q6IA69 706 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 KIAA1324Q6UXG2 1013 aaKnown RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 USP30Q70CQ3 517 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 TAC4Q86UU9 113 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 ZNF677Q86XU0 584 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 CREBRFQ8IUR6 639 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 MFN1Q8IWA4 741 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 WDTC1Q8N5D0 677 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 MSANTD4Q8NCY6 345 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 PGAP3Q96FM1 320 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 RXFP3Q9NSD7 469 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 LMBRD1Q9NUN5 540 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 KIAA1522Q9P206 1035 aaPredicted RBP10.37□□□□□ -0.75
HDLBP-228ENST00000459788 TJP2Q9UDY2 1190 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 RAD54BQ9Y620 910 aa10.37□□□□□ -0.75
HDLBP-228ENST00000459788 ITIH6Q6UXX5 1313 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TARSL2A2RTX5 802 aaKnown RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 C4orf47A7E2U8 309 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 METTL12A8MUP2 240 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 F5H5T6 163 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 FOXN3O00409 490 aaPredicted RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 PIK3R2O00459 728 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 ARHGAP33O14559 1287 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 DAB1O75553 588 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 LUC7L3O95232 432 aaKnown RBP10.36□□□□□ -0.75
HDLBP-228ENST00000459788 F9P00740 461 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TPM2P07951 284 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 ABCB4P21439 1286 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 TACR2P21452 398 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 ITPKAP23677 461 aa10.36□□□□□ -0.75
HDLBP-228ENST00000459788 PRKCHP24723 683 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms