RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 PCDHGA3Q9Y5H0 932 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 TNS3Q68CZ2 1445 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 IDH3BO43837 385 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 SPAG6O75602 509 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 F9P00740 461 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 TRIM16LQ309B1 348 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 DAB2IPQ5VWQ8 1189 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 SLC30A10Q6XR72 485 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 MID1IP1Q9NPA3 183 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 SCAMP1O15126 338 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 BST2Q10589 180 aaKnown RBP16.38■□□□□ 0.21
HDAC7-217ENST00000459625 ITPK1Q13572 414 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 GPR141Q7Z602 305 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 TBC1D13Q9NVG8 400 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 IGF2BP3O00425 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
HDAC7-217ENST00000459625 CRATP43155 626 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 RENBPP51606 427 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 ATG9AQ7Z3C6 839 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 SCUBE3Q8IX30 993 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 RERGQ96A58 199 aaPredicted RBP16.38■□□□□ 0.21
HDAC7-217ENST00000459625 SERPINB12Q96P63 405 aa16.38■□□□□ 0.21
HDAC7-217ENST00000459625 CDK5RAP1Q96SZ6 601 aaKnown RBP16.38■□□□□ 0.21
HDAC7-217ENST00000459625 ISM1B1AKI9 464 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 FOXN3O00409 490 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 PPP1R26Q5T8A7 1209 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ZNF677Q86XU0 584 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ADSSL1Q8N142 457 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 BPIFA3Q9BQP9 254 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 CNPY3Q9BT09 278 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 FBXO44Q9H4M3 255 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TOR4AQ9NXH8 423 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SEPT3Q9UH03 358 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TMEM114B3SHH9 223 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ZBTB14O43829 449 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 MED24O75448 989 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 RPA1P27694 616 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 POLD2P49005 469 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 NDST1P52848 882 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ACAP2Q15057 778 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 GPR152Q8TDT2 470 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 UBASH3BQ8TF42 649 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SPATC1LQ9H0A9 340 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SHANK2Q9UPX8 1470 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 PGK1P00558 417 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 EXOSC10Q01780 885 aaKnown RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SCRN3Q0VDG4 424 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TFDP3Q5H9I0 405 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ZNF655Q8N720 491 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 PPP1R16AQ96I34 528 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TM6SF2Q9BZW4 377 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 NDRG2Q9UN36 371 aaKnown RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SLC27A5Q9Y2P5 690 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 MANSC4A6NHS7 340 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ZNHIT3Q15649 155 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 PDZK1Q5T2W1 519 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TMED8Q6PL24 325 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SPOCD1Q6ZMY3 1216 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SYT12Q8IV01 421 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 DENND1CQ8IV53 801 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 ADGRG2Q8IZP9 1017 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 A1CFQ9NQ94 594 aaKnown RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 FAM50BQ9Y247 325 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 DRG1Q9Y295 367 aaKnown RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TRAV19A0A0A6YYK7 116 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TRIQKQ629K1 86 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 USP49Q70CQ1 688 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 HAO1Q9UJM8 370 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
HDAC7-217ENST00000459625 SRP54P61011 504 aaKnown RBP16.36■□□□□ 0.21
HDAC7-217ENST00000459625 HERVK_113P62684 666 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 CDC73Q6P1J9 531 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 ISLR2Q6UXK2 745 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 TRPM8Q7Z2W7 1104 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 ZC3H7AQ8IWR0 971 aaKnown RBP16.36■□□□□ 0.21
HDAC7-217ENST00000459625 CHPFQ8IZ52 775 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 AGGF1Q8N302 714 aaeCLIP16.36■□□□□ 0.21
HDAC7-217ENST00000459625 EXOC2Q96KP1 924 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 ARL15Q9NXU5 204 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 LIMD1Q9UGP4 676 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 ANGPT4Q9Y264 503 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 KRT6AP02538 564 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 KRT6BP04259 564 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 NTRK1P04629 796 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 CYP11B2P19099 503 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 BGNP21810 368 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 AMPD1P23109 780 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 KRT6CP48668 564 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 NUP107P57740 925 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 MPP3Q13368 585 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 MAPK11Q15759 364 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 PDPK2PQ6A1A2 396 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 CCT8L2Q96SF2 557 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 POLR1BQ9H9Y6 1135 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 COMMD8Q9NX08 183 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 UXTQ9UBK9 157 aaPredicted RBP16.36■□□□□ 0.21
HDAC7-217ENST00000459625 CES2O00748 559 aa16.36■□□□□ 0.21
HDAC7-217ENST00000459625 TRIM24O15164 1050 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms