RNA–Protein interactions for RNA: ENST00000458721.5

VPS8-214, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 946 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-214ENST00000458721 ZNF587Q96SQ5 575 aaPredicted RBP5.96□□□□□ -1.46
VPS8-214ENST00000458721 MRPL45Q9BRJ2 306 aaKnown RBP5.96□□□□□ -1.46
VPS8-214ENST00000458721 B3GNT5Q9BYG0 378 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 SLC2A11Q9BYW1 496 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 DCLK3Q9C098 648 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 IKZF4Q9H2S9 585 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 PCIF1Q9H4Z3 704 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 CCSER2Q9H7U1 834 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 PRDM16Q9HAZ2 1276 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 ITM2CQ9NQX7 267 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 AGPAT3Q9NRZ7 376 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 TM7SF3Q9NS93 570 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 KRT82Q9NSB4 513 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 CACNA2D2Q9NY47 1150 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 CLIC5Q9NZA1 410 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 TPX2Q9ULW0 747 aaKnown RBP5.96□□□□□ -1.46
VPS8-214ENST00000458721 SCML2Q9UQR0 700 aa5.96□□□□□ -1.46
VPS8-214ENST00000458721 METTL12A8MUP2 240 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 PRRT4C9JH25 899 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 TGFBR3LH3BV60 316 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 YKT6O15498 198 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 TNFSF14O43557 240 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 TIMM44O43615 452 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 STX6O43752 255 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 SYNCRIPO60506 623 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 RPN1P04843 607 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 FAM200BP0CF97 657 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 HNF1BP35680 557 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 CHRNA4P43681 627 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 ABCG1P45844 678 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 CCT8P50990 548 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 TPMTP51580 245 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 COG7P83436 770 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 INCA1Q0VD86 236 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 IFRD2Q12894 506 aaPredicted RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 SMAD1Q15797 465 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 ZNF699Q32M78 642 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 FUT11Q495W5 492 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 PRRT3Q5FWE3 981 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 FAM26FQ5R3K3 315 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 KIAA1324Q6UXG2 1013 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 CCDC186Q7Z3E2 898 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 FUKQ8N0W3 1084 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 CRYBG2Q8N1P7 616 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 CPXM2Q8N436 756 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 ZCCHC9Q8N567 271 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 NAT16Q8N8M0 369 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 ZNF557Q8N988 423 aaPredicted RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 SCAMP5Q8TAC9 235 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 ZNF507Q8TCN5 953 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 NOC3LQ8WTT2 800 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 PRCCQ92733 491 aaPredicted RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 BHMTQ93088 406 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 IGSF8Q969P0 613 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 SIPA1Q96FS4 1042 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 TOE1Q96GM8 510 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 MED10Q9BTT4 135 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 NUP58Q9BVL2 599 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 TRIM9Q9C026 710 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 DPEP3Q9H4B8 488 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 GAREM1Q9H706 876 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 UPF2Q9HAU5 1272 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.95□□□□□ -1.46
VPS8-214ENST00000458721 KBTBD4Q9NVX7 518 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 GMIPQ9P107 970 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 THAP10Q9P2Z0 257 aaPredicted RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 SCML1Q9UN30 329 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 NME7Q9Y5B8 376 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 PCDHGA1Q9Y5H4 931 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 STON1Q9Y6Q2 735 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 CABIN1Q9Y6J0 2220 aa5.95□□□□□ -1.46
VPS8-214ENST00000458721 URB1O60287 2271 aaKnown RBP5.95□□□□□ -1.46
VPS8-214ENST00000458721 PTPRQQ9UMZ3 2332 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 ANTXRLA6NF34 631 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 SCAMP3O14828 347 aaKnown RBP5.94□□□□□ -1.46
VPS8-214ENST00000458721 TGFB1I1O43294 461 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 PHACTR2O75167 634 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 LATS1O95835 1130 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 CST3P01034 146 aaPredicted RBP5.94□□□□□ -1.46
VPS8-214ENST00000458721 CYBBP04839 570 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 C1SP09871 688 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 CISD3P0C7P0 127 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 RALAP11233 206 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 ACADMP11310 421 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 HLA-EP13747 358 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 MFAP3P55082 362 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 CDH8P55286 799 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 MYL6P60660 151 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 ENPEPQ07075 957 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 EHHADHQ08426 723 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 BIRC3Q13489 604 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 CAMK2GQ13555 558 aaPredicted RBP5.94□□□□□ -1.46
VPS8-214ENST00000458721 SLC39A14Q15043 492 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 SGSM1Q2NKQ1 1148 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 HLA-BQ31612 363 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 TTC31Q49AM3 519 aaPredicted RBP5.94□□□□□ -1.46
VPS8-214ENST00000458721 DCAF12L1Q5VU92 463 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 PAQR9Q6ZVX9 377 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 USP49Q70CQ1 688 aa5.94□□□□□ -1.46
VPS8-214ENST00000458721 TMPRSS12Q86WS5 348 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms