RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 PLD1Q13393 1074 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 AP5B1Q2VPB7 878 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 ZNF720Q7Z2F6 126 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 WDR49Q8IV35 697 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 OR6Y1Q8NGX8 325 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 ACTRT1Q8TDG2 376 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 USP7Q93009 1102 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 UBXN6Q9BZV1 441 aa20.08■□□□□ 0.81
SNX27-204ENST00000458013 FAM47E-STBD1D6RA91 191 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 SMAPO00193 183 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 HLA-DQA2P01906 255 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 CLTBP09497 229 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 FAM58BPP0C7Q3 252 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 PTPN11Q06124 597 aaPredicted RBP20.08■□□□□ 0.8
SNX27-204ENST00000458013 NBPF12Q5TAG4 269 aaPredicted RBP20.08■□□□□ 0.8
SNX27-204ENST00000458013 ZNF470Q6ECI4 717 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 DPF3Q92784 378 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 EMID1Q96A84 441 aaPredicted RBP20.08■□□□□ 0.8
SNX27-204ENST00000458013 OMA1Q96E52 524 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 CYP2C8P10632 490 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 KRT20P35900 424 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 TRIQKQ629K1 86 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 MARK2Q7KZI7 788 aaKnown RBP20.08■□□□□ 0.8
SNX27-204ENST00000458013 PCDH20Q8N6Y1 951 aaKnown RBP20.08■□□□□ 0.8
SNX27-204ENST00000458013 KIAA0895Q8NCT3 520 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 CLIP3Q96DZ5 547 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 ZDHHC6Q9H6R6 413 aa20.08■□□□□ 0.8
SNX27-204ENST00000458013 KCNK1O00180 336 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 GMFGO60234 142 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 SLC39A12Q504Y0 691 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 CYP20A1Q6UW02 462 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 BTN2A1Q7KYR7 527 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 CAMKK1Q8N5S9 505 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 SYBUQ9NX95 663 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 TOR4AQ9NXH8 423 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ATXN2Q99700 1313 aaKnown RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 PSMD12O00232 456 aaPredicted RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 KPNA1P52294 538 aaPredicted RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 ARMC4Q5T2S8 1044 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ZNF621Q6ZSS3 439 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 DHFR2Q86XF0 187 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 BHLHE22Q8NFJ8 381 aaPredicted RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 IPCEF1Q8WWN9 437 aaPredicted RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 A1CFQ9NQ94 594 aaKnown RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 DNPEPQ9ULA0 475 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 TPP1O14773 563 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 TPBGLP0DKB5 382 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ITGAXP20702 1163 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 TPP2P29144 1249 aaPredicted RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 CYP4F2P78329 520 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 CYP4F3Q08477 520 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ZBTB46Q86UZ6 589 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 POMGNT2Q8NAT1 580 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 NINJ2Q9NZG7 142 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 TULP4Q9NRJ4 1543 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ADGRA3Q8IWK6 1321 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ZNF839A8K0R7 811 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 PHGDHO43175 533 aaKnown RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 HMGCRP04035 888 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ZNF484Q5JVG2 852 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ALKBH2Q6NS38 261 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 FBXO39Q8N4B4 442 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ACTL9Q8TC94 416 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 TLR8Q9NR97 1041 aaKnown RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 FBXO10Q9UK96 956 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 LYVE1Q9Y5Y7 322 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 LACTBL1A8MY62 500 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 IFRD1O00458 451 aaPredicted RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 DGCR6Q14129 220 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 FAM98BQ52LJ0 330 aaKnown RBP20.07■□□□□ 0.8
SNX27-204ENST00000458013 CASP12Q6UXS9 341 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 MCOLN2Q8IZK6 566 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 FBXO30Q8TB52 745 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 MTMR8Q96EF0 704 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 CDHR5Q9HBB8 845 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 AAASQ9NRG9 546 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 ABCA6Q8N139 1617 aa20.07■□□□□ 0.8
SNX27-204ENST00000458013 GTF2A2P52657 109 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 TBX4P57082 545 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 IL27RAQ6UWB1 636 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 KYQ8NBH2 561 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 DAGLBQ8NCG7 672 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 PLA2G4CQ9UP65 541 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 SNTNA6NMZ2 147 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 FAM220BPB1ANY3 271 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 SREBF2Q12772 1141 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 FAM171A1Q5VUB5 890 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 TAF2Q6P1X5 1199 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 SNX32Q86XE0 403 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 EID3Q8N140 333 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 EHD4Q9H223 541 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 NCKIPSDQ9NZQ3 722 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 FAM50BQ9Y247 325 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 A0A0A6YYK5 440 aaPredicted RBP20.06■□□□□ 0.8
SNX27-204ENST00000458013 PRKAG1P54619 331 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 PGM5Q15124 567 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 PLAGL2Q9UPG8 496 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 SLC26A4O43511 780 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 RBP1P09455 135 aa20.06■□□□□ 0.8
SNX27-204ENST00000458013 GRIK4Q16099 956 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms