RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 MMEP08473 750 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 SLC2A3P11169 496 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 ABCB4P21439 1286 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 TACR2P21452 398 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 CDH5P33151 784 aaPredicted RBP16.81■□□□□ 0.28
CPSF6-203ENST00000456847 RPS24P62847 133 aaKnown RBP16.81■□□□□ 0.28
CPSF6-203ENST00000456847 NME3Q13232 169 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 TMEM215Q68D42 235 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 CFAP52Q8N1V2 620 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.81■□□□□ 0.28
CPSF6-203ENST00000456847 CYB5D2Q8WUJ1 264 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 MBD1Q9UIS9 605 aaPredicted RBP16.81■□□□□ 0.28
CPSF6-203ENST00000456847 CYP8B1Q9UNU6 501 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 SIK3Q9Y2K2 1263 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF292O60281 2723 aa16.81■□□□□ 0.28
CPSF6-203ENST00000456847 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 F5H5T6 163 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF217O75362 1048 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 CAVIN2O95810 425 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 EPHX1P07099 455 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF806P0C7X5 589 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 POLR2EP19388 210 aaKnown RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 PRKCHP24723 683 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 CCR1P32246 355 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 CD70P32970 193 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 SOX5P35711 763 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 RNASE9P60153 205 aaKnown RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 FUT11Q495W5 492 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 FAM102AQ5T9C2 384 aaPredicted RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 MBLAC2Q68D91 279 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 SLC36A4Q6YBV0 504 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 TMEFF1Q8IYR6 380 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 NETO1Q8TDF5 533 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 DDX1Q92499 740 aaKnown RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 C18orf8Q96DM3 657 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 PLA2G4CQ9UP65 541 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 BCLAF3A2AJT9 711 aaKnown RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 EPHB6O15197 1021 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 NOS2P35228 1153 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 STAT1P42224 750 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 RPL6Q02878 288 aaKnown RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 NCAPHQ15003 741 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 NAA35Q5VZE5 725 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 DGLUCYQ7Z3D6 616 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF677Q86XU0 584 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF397Q8NF99 534 aaPredicted RBP16.8■□□□□ 0.28
CPSF6-203ENST00000456847 SLC20A1Q8WUM9 679 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 MYEOVQ96EZ4 313 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 MRGPRX1Q96LB2 322 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 PRDM16Q9HAZ2 1276 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 CD248Q9HCU0 757 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 STAP1Q9ULZ2 295 aa16.8■□□□□ 0.28
CPSF6-203ENST00000456847 KCNU1A8MYU2 1149 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 H0Y626 953 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 GOLGA8SH3BPF8 625 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 M0QYT0 321 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 AP5Z1O43299 807 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 LUC7L3O95232 432 aaKnown RBP16.79■□□□□ 0.28
CPSF6-203ENST00000456847 ATP5BP06576 529 aaKnown RBP16.79■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF18P17022 549 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 SULT1E1P49888 294 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 JAM2P57087 298 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 NOMO3P69849 1222 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 LMAN2Q12907 356 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 ENPP2Q13822 863 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 PLA2G2CQ5R387 149 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 ADIPOR2Q86V24 386 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 CACUL1Q86Y37 369 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 FIBINQ8TAL6 211 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 CPA5Q8WXQ8 436 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 PIGKQ92643 395 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 DLL3Q9NYJ7 618 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 RRN3Q9NYV6 651 aa16.79■□□□□ 0.28
CPSF6-203ENST00000456847 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.79■□□□□ 0.28
CPSF6-203ENST00000456847 IGHV1OR15-9A0A0B4J2B8 117 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 SMTNL1A8MU46 457 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 GDF9O60383 454 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 HLA-EP13747 358 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 MATKP42679 507 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 RABGAP1LQ5R372 815 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 LYSMD4Q5XG99 296 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 RNF43Q68DV7 783 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 TCEAL6Q6IPX3 200 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 SND1Q7KZF4 910 aaKnown RBP eCLIP16.78■□□□□ 0.28
CPSF6-203ENST00000456847 KIAA0907Q7Z7F0 614 aaPredicted RBP16.78■□□□□ 0.28
CPSF6-203ENST00000456847 XYLT1Q86Y38 959 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 TCEAL3Q969E4 200 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
CPSF6-203ENST00000456847 NDUFS2O75306 463 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 MOCS3O95396 460 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 ATP1A3P13637 1013 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 GABRB2P47870 512 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 CDR2Q01850 454 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 C2CD6Q53TS8 623 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 DEFB119Q8N690 84 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 ZNF366Q8N895 744 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 PRCCQ92733 491 aaPredicted RBP16.78■□□□□ 0.28
CPSF6-203ENST00000456847 BPIFA3Q9BQP9 254 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 RTKNQ9BST9 563 aa16.78■□□□□ 0.28
CPSF6-203ENST00000456847 CD93Q9NPY3 652 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms