RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 ATP5BP06576 529 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 MMP8P22894 467 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 HLA-FP30511 346 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 CLEC16AQ2KHT3 1053 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 SLC25A52Q3SY17 297 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 RASSF3Q86WH2 238 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 DCLK2Q8N568 766 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 MDGA1Q8NFP4 955 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 PCDHB18PQ96TA0 734 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 SELENOOQ9BVL4 669 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 METTL5Q9NRN9 209 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 THAP10Q9P2Z0 257 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 HCN2Q9UL51 889 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 RAD54BQ9Y620 910 aa18.71■□□□□ 0.59
PDLIM2-215ENST00000456545 LRRC53A6NM62 1247 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 WASH3PC4AMC7 463 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 RHOBTB1O94844 696 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 CALB1P05937 261 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 TPM3P06753 285 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 UNGP13051 313 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 EIF4EBP2Q13542 120 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 ELF2Q15723 593 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 FNDC3BQ53EP0 1204 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 BRMS1LQ5PSV4 323 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 SERPINA13PQ6UXR4 307 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 C11orf74Q86VG3 221 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 FAM160A2Q8N612 972 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 FIBINQ8TAL6 211 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 SORCS1Q8WY21 1168 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 SPACA7Q96KW9 195 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 PRICKLE1Q96MT3 831 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 RPRD1AQ96P16 312 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 TBCBQ99426 244 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 EDEM3Q9BZQ6 932 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 TKTL2Q9H0I9 626 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 TSPY26PQ9H489 355 aa18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 KIAA1522Q9P206 1035 aaPredicted RBP18.7■□□□□ 0.58
PDLIM2-215ENST00000456545 ANKRD62A6NC57 917 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 LUC7L3O95232 432 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 RETP07949 1114 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 KRT3P12035 628 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 CD70P32970 193 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 FLT3P36888 993 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 ST8SIA6P61647 398 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 ATP11AP98196 1134 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 CENPCQ03188 943 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 ZNF234Q14588 700 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 TTC39BQ5VTQ0 682 aaPredicted RBP18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 MBLAC2Q68D91 279 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 IRF2BP2Q7Z5L9 587 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 KBTBD6Q86V97 674 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 GPR161Q8N6U8 529 aaKnown RBP18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 CYB5D2Q8WUJ1 264 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 BAP1Q92560 729 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 CFAP57Q96MR6 1250 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 GABRG3Q99928 467 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 PIGVQ9NUD9 493 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 IFNKQ9P0W0 207 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 TMEM59LQ9UK28 342 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 VANGL2Q9ULK5 521 aa18.69■□□□□ 0.58
PDLIM2-215ENST00000456545 DCLK1O15075 740 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 PAGE1O75459 146 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 EPHX1P07099 455 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 CHRM1P11229 460 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 PDGFRAP16234 1089 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 SDC4P31431 198 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 IL12RB1P42701 662 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 CXCR3P49682 368 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 KLHL30Q0D2K2 578 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 AUHQ13825 339 aaKnown RBP18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 NFKBIBQ15653 356 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 CDO1Q16878 200 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 TMEM215Q68D42 235 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 ACAD10Q6JQN1 1059 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 PPP1R2P3Q6NXS1 205 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 LRRC31Q6UY01 552 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 ARCQ7LC44 396 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 PHF13Q86YI8 300 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 KIAA2013Q8IYS2 634 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 EMC1Q8N766 993 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 WFDC5Q8TCV5 224 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 CPLX3Q8WVH0 158 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 RXFP2Q8WXD0 754 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 RLN3Q8WXF3 142 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 MYEOVQ96EZ4 313 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 PGAP3Q96FM1 320 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 PPP1R9BQ96SB3 815 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 USP18Q9UMW8 372 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 HS3ST4Q9Y661 456 aa18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 ZFHX2Q9C0A1 2572 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-215ENST00000456545 A0A1W2PQF6 199 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 ADCY5O95622 1261 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 DESP17661 470 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 GABRG2P18507 467 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 TFE3P19532 575 aaPredicted RBP18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 RDXP35241 583 aaKnown RBP18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 OXCT1P55809 520 aa18.67■□□□□ 0.58
PDLIM2-215ENST00000456545 LMAN2Q12907 356 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms