RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 RAP1GAPP47736 663 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 HARS2P49590 506 aaKnown RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 RPS6P62753 249 aaKnown RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 MTERF2Q49AM1 385 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 KCTD21Q4G0X4 260 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 FSCBQ5H9T9 825 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 IL23RQ5VWK5 629 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CASC4Q6P4E1 433 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PACS1Q6VY07 963 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 BNC2Q6ZN30 1099 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 NCCRP1Q6ZVX7 275 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ANKRD23Q86SG2 305 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 TMEM102Q8N9M5 508 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 FNIP1Q8TF40 1166 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 EME1Q96AY2 570 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 RCN3Q96D15 328 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PRMT6Q96LA8 375 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 RANBP9Q96S59 729 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 SERPINI1Q99574 410 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ACO2Q99798 780 aaKnown RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 DCUN1D5Q9BTE7 237 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 INO80BQ9C086 356 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PCDHGC3Q9UN70 934 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 LRRIQ4A6NIV6 560 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 GRAP2O75791 330 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 DGAT1O75907 488 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ICAM1P05362 532 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PORP16435 677 aaPredicted RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CTBSQ01459 385 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 KRT76Q01546 638 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 MGAT5BQ3V5L5 792 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 STXBP5Q5T5C0 1151 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 TRNP1Q6NT89 227 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CMC1Q7Z7K0 106 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 MYO1HQ8N1T3 1032 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CATSPER1Q8NEC5 780 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PDCD6IPQ8WUM4 868 aaKnown RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ATP2A3Q93084 1043 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 GFM2Q969S9 779 aaKnown RBP10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ATP6V1E2Q96A05 226 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 PGLYRP2Q96PD5 576 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CDH19Q9H159 772 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 COQ10BQ9H8M1 238 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ANLNQ9NQW6 1124 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CYP26B1Q9NR63 512 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CLIP4-208ENST00000456385 ARHGEF37A1IGU5 675 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 K7ERI5 159 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PLOD2O00469 737 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 ENDOD1O94919 500 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 H6PDO95479 791 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 HSPA4LO95757 839 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 GLDCP23378 1020 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PRDX6P30041 224 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 ALDH3B2P48448 385 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 YWHAEP62258 255 aaKnown RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PHEXP78562 749 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 TMEM198Q66K66 360 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 ZFP1Q6P2D0 407 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 TMEM126BQ8IUX1 230 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CCDC60Q8IWA6 550 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CDAN1Q8IWY9 1227 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PLD6Q8N2A8 252 aaKnown RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 MCPH1Q8NEM0 835 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 LRRC39Q96DD0 335 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 ATXN7L3BQ96GX2 97 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PIWIL1Q96J94 861 aaKnown RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 MARK4Q96L34 752 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 SLC4A5Q9BY07 1137 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 FRMD8Q9BZ67 464 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 OSBPL6Q9BZF3 934 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 NIF3L1Q9GZT8 377 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 DEFB129Q9H1M3 183 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PLGRKTQ9HBL7 147 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 TCF7L2Q9NQB0 619 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 OLAHQ9NV23 265 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 TBCCD1Q9NVR7 557 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 NXF1Q9UBU9 619 aaKnown RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 DCDC2Q9UHG0 476 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PADI4Q9UM07 663 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PRPF19Q9UMS4 504 aaKnown RBP10.57□□□□□ -0.72
CLIP4-208ENST00000456385 KANSL1LA0AUZ9 987 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CPA3P15088 417 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CAP2P40123 477 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 MLH1P40692 756 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CCR10P46092 362 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 HSPA13P48723 471 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 SLC5A3P53794 718 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CDH8P55286 799 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 BCAR1P56945 870 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 TGFB2P61812 414 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PFKPQ01813 784 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 PRKCEQ02156 737 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CNTN2Q02246 1040 aa10.57□□□□□ -0.72
CLIP4-208ENST00000456385 CBLBQ13191 982 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms