RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 TMEM245Q9H330 911 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 MMRN2Q9H8L6 949 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 RAB20Q9NX57 234 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 NCKAP1Q9Y2A7 1128 aa8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 FNDC3AQ9Y2H6 1198 aaKnown RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-209ENST00000454952 TMEM131Q92545 1883 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 A0A1B0GVT2 93 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 EIF4E1BA6NMX2 242 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 CETN3O15182 167 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 YKT6O15498 198 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 DKK1O94907 266 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 DLDP09622 509 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SETSIPP0DME0 302 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 PABPC1P11940 636 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 POLR2EP19388 210 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 TBXAS1P24557 533 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 HOXD9P28356 352 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SLC11A2P49281 568 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 CSNK1EP49674 416 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 RAD23BP54727 409 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 C21orf59P57076 290 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ST8SIA6P61647 398 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 KRT85P78386 507 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 DNM1Q05193 864 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 BST2Q10589 180 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 KIF19Q2TAC6 998 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 GOLGA7BQ2TAP0 167 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SGO2Q562F6 1265 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 NUGGCQ68CJ6 796 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ZNF776Q68DI1 518 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 USP30Q70CQ3 517 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 CHST9Q7L1S5 443 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SLCO6A1Q86UG4 719 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 FAM124AQ86V42 546 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SCML4Q8N228 414 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SLC4A11Q8NBS3 891 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SORCS1Q8WY21 1168 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 KCTD13Q8WZ19 329 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 SPATA32Q96LK8 384 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ACE2Q9BYF1 805 aaPredicted RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 GTPBP4Q9BZE4 634 aaKnown RBP8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ULBP1Q9BZM6 244 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 IL21RQ9HBE5 538 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 CNGB3Q9NQW8 809 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ABCC13Q9NSE7 274 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 GGA2Q9UJY4 613 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 HPSEQ9Y251 543 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 ANKRD6Q9Y2G4 727 aa8.36□□□□□ -1.07
NIF3L1-209ENST00000454952 TP53BP1Q12888 1972 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ZZEF1O43149 2961 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 FAM237AA0A1B0GTK4 181 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 A0A1B0GVL5 298 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 PAPSS1O43252 624 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TSPAN3O60637 253 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 FSBPO95073 299 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ASLP04424 464 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 C1SP09871 688 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ATXN1LP0C7T5 689 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 VDRP11473 427 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 HLA-FP30511 346 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 HNF1BP35680 557 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 RPS14P62263 151 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 RACK1P63244 317 aaKnown RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 BNC1Q01954 994 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ADIGQ0VDE8 80 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 COL28A1Q2UY09 1125 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 SLC45A4Q5BKX6 768 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 BSPRYQ5W0U4 402 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TMEM215Q68D42 235 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 MBLAC2Q68D91 279 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 KIAA0907Q7Z7F0 614 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ADIPOR2Q86V24 386 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TMPRSS12Q86WS5 348 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 CACUL1Q86Y37 369 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 SCUBE3Q8IX30 993 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 KDM1BQ8NB78 822 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 HJURPQ8NCD3 748 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 GANCQ8TET4 914 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 IRGQQ8WZA9 623 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 AZIN2Q96A70 460 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 BIRC7Q96CA5 298 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TSG101Q99816 390 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TRIM62Q9BVG3 475 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 C6orf106Q9H6K1 298 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TM9SF3Q9HD45 589 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 PRSS16Q9NQE7 514 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ABCB8Q9NUT2 735 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 RMND1Q9NWS8 449 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 FTSJ1Q9UET6 329 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 TSPAN16Q9UKR8 245 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 PCDHGA1Q9Y5H4 931 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 ATP6V1DQ9Y5K8 247 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 SNX11Q9Y5W9 270 aa8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 COL5A1P20908 1838 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 MUC22E2RYF6 1773 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-209ENST00000454952 DMXL2Q8TDJ6 3036 aa8.34□□□□□ -1.07
NIF3L1-209ENST00000454952 A0A1W2PQ27 194 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms