RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ATP6V1B1P15313 513 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 PKNOX1P55347 436 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 BNIP1Q12981 228 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 KHDC1Q4VXA5 237 aaKnown RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 CXCL17Q6UXB2 119 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 CDHR3Q6ZTQ4 885 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 ZNF570Q96NI8 536 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 PDZD7Q9H5P4 517 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 WDCPQ9H6R7 721 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 NDE1Q9NXR1 346 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 TSC22D4Q9Y3Q8 395 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 NFASCO94856 1347 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 CILPO75339 1184 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 MTA2O94776 668 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 APOEP02649 317 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 CSH1P0DML2 217 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 CSH2P0DML3 217 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 PTPN4P29074 926 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 GPD2P43304 727 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 MGAT5Q09328 741 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 HIC1Q14526 733 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 PRPSAP1Q14558 356 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 ARL13BQ3SXY8 428 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 CERCAMQ5T4B2 595 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 UNC5AQ6ZN44 842 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 RIBC1Q8N443 379 aaPredicted RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 FAM193BQ96PV7 902 aaPredicted RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 TXLNGYQ9BZA5 131 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 EBF2Q9HAK2 575 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 GRID1Q9ULK0 1009 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 TNFSF13BQ9Y275 285 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 SDR42E2A6NKP2 422 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 TNPO2O14787 897 aaKnown RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 ATP5HO75947 161 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 PTDSS1P48651 473 aaKnown RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 OAZ1P54368 228 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 MBTD1Q05BQ5 628 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 SPOUT1Q5T280 376 aaKnown RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 CLNKQ7Z7G1 428 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 TTC30AQ86WT1 665 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 GORASP1Q9BQQ3 440 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 NUF2Q9BZD4 464 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 GPBP1L1Q9HC44 474 aaPredicted RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 GALNT8Q9NY28 637 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 CORO1CQ9ULV4 474 aaPredicted RBP11.47□□□□□ -0.57
DDR1-240ENST00000454612 PSME4Q14997 1843 aa11.47□□□□□ -0.57
DDR1-240ENST00000454612 TREHO43280 583 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 SEC24DO94855 1032 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 POLBP06746 335 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 NUDT2P50583 147 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 MAXP61244 160 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 KLF1Q13351 362 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 CTBP1Q13363 440 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 CYTH1Q15438 398 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 SOWAHAQ2M3V2 549 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 BTBD8Q5XKL5 378 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 TRIM67Q6ZTA4 783 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 DEFB107AQ8IZN7 70 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 ARHGAP18Q8N392 663 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 SKA2Q8WVK7 121 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 WDR55Q9H6Y2 383 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 XAB2Q9HCS7 855 aaKnown RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 SYNPO2Q9UMS6 1093 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 COL2A1P02458 1487 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 VAPBO95292 243 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 OR4Q2P0C623 313 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 HUNKP57058 714 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 YWHAZP63104 245 aaKnown RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 TMEM259Q4ZIN3 620 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 CDCA2Q69YH5 1023 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 C2orf69Q8N8R5 385 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 C12orf50Q8NA57 414 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 ZSCAN18Q8TBC5 510 aaPredicted RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 NMD3Q96D46 503 aaKnown RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 MFSD3Q96ES6 412 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 APOPT1Q96IL0 206 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 DRG1Q9Y295 367 aaKnown RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 MTO1Q9Y2Z2 717 aaKnown RBP11.46□□□□□ -0.57
DDR1-240ENST00000454612 WASF2Q9Y6W5 498 aa11.46□□□□□ -0.57
DDR1-240ENST00000454612 TTC24A2A3L6 582 aaPredicted RBP11.46□□□□□ -0.58
DDR1-240ENST00000454612 C2CD2LO14523 706 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 MX2P20592 715 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 SCNN1GP51170 649 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 ZNF460Q14592 562 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 ICA1LQ8NDH6 482 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 CATSPER2Q96P56 530 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 RUVBL2Q9Y230 463 aaKnown RBP11.46□□□□□ -0.58
DDR1-240ENST00000454612 ATP8B3O60423 1300 aa11.46□□□□□ -0.58
DDR1-240ENST00000454612 ATP6AP2A0A1C7CYW4 349 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 DPPA5A6NC42 116 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 C5orf60A6NFR6 353 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 NCF1BA6NI72 391 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 SRRM3A6NNA2 597 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 NCF1CA8MVU1 366 aaPredicted RBP11.45□□□□□ -0.58
DDR1-240ENST00000454612 C9JVG2 144 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 PEX1O43933 1283 aa11.45□□□□□ -0.58
DDR1-240ENST00000454612 ATP6AP2O75787 350 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms