RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 GRAP2O75791 330 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 IGLV3-25P01717 112 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 DLDP09622 509 aaKnown RBP11.07□□□□□ -0.64
DDX39A-203ENST00000454233 ACADMP11310 421 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 ABCB4P21439 1286 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 TACR2P21452 398 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 KCNA4P22459 653 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 PRKCHP24723 683 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 CD70P32970 193 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 HOXD12P35452 270 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 RPS24P62847 133 aaKnown RBP11.07□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF33AQ06730 810 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 MTA1Q13330 715 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 TAF5Q15542 800 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 STX1AQ16623 288 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 TRIM61Q5EBN2 209 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 CDKAL1Q5VV42 579 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 RAP1GAP2Q684P5 730 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 DPY19L2P1Q6NXN4 242 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 FAM183BPQ6ZVS7 135 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 RABEPKQ7Z6M1 372 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 KIAA0907Q7Z7F0 614 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-203ENST00000454233 ADIPOR2Q86V24 386 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 TMPRSS6Q8IU80 811 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 ZDHHC17Q8IUH5 632 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 LGI2Q8N0V4 545 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 CARNMT1Q8N4J0 409 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 DEFB119Q8N690 84 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 MSANTD4Q8NCY6 345 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 FIBINQ8TAL6 211 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 CEP76Q8TAP6 659 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 WFDC5Q8TCV5 224 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 CYB5D2Q8WUJ1 264 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 FOXJ1Q92949 421 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 PRICKLE1Q96MT3 831 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-203ENST00000454233 SLC2A13Q96QE2 648 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 STK33Q9BYT3 514 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 MKRN2Q9H000 416 aaKnown RBP11.07□□□□□ -0.64
DDX39A-203ENST00000454233 PLCB1Q9NQ66 1216 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 COX16Q9P0S2 106 aa11.07□□□□□ -0.64
DDX39A-203ENST00000454233 EVLQ9UI08 416 aaPredicted RBP11.07□□□□□ -0.64
DDX39A-203ENST00000454233 LNP1A1A4G5 178 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 KCNU1A8MYU2 1149 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 PATE3B3GLJ2 98 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 F5H5T6 163 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 H0Y626 953 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 DAB1O75553 588 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 LUC7L3O95232 432 aaKnown RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 MOCS3O95396 460 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ASLP04424 464 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ERBB2P04626 1255 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CFIP05156 583 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 HLA-EP13747 358 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CYP11B1P15538 503 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ITPKAP23677 461 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CD6P30203 668 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 OXTRP30559 389 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CCR1P32246 355 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ST8SIA6P61647 398 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 PITX1P78337 314 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 IRX4P78413 519 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 SLC6A3Q01959 620 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 MYL5Q02045 173 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 LMAN2Q12907 356 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CAMK2GQ13555 558 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 KRT31Q15323 416 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 DUOXA1Q1HG43 343 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 PTPN20Q4JDL3 420 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 PPM1JQ5JR12 505 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 RABGAP1LQ5R372 815 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 SYCP2LQ5T4T6 812 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CCDC183Q5T5S1 534 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 TAF3Q5VWG9 929 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 DAB2IPQ5VWQ8 1189 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 OLFML1Q6UWY5 402 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 SLC26A9Q7LBE3 791 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 RGL4Q8IZJ4 473 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 CFAP52Q8N1V2 620 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ZNF397Q8NF99 534 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 OR2T3Q8NH03 318 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 HSPA12BQ96MM6 686 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 NAA15Q9BXJ9 866 aaKnown RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 TMEM245Q9H330 911 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 FBRSQ9HAH7 460 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 TMEM9BQ9NQ34 198 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ITM2CQ9NQX7 267 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 FANCLQ9NW38 375 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 RRN3Q9NYV6 651 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 KIAA1522Q9P206 1035 aaPredicted RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 USP36Q9P275 1121 aaKnown RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 SUN2Q9UH99 717 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 XPO7Q9UIA9 1087 aaKnown RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 PILRBQ9UKJ0 227 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 DAAM1Q9Y4D1 1078 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 GON4LQ3T8J9 2241 aa11.06□□□□□ -0.64
DDX39A-203ENST00000454233 ATXN2Q99700 1313 aaKnown RBP11.06□□□□□ -0.64
DDX39A-203ENST00000454233 C4orf47A7E2U8 309 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 F8VZ95 297 aa11.05□□□□□ -0.64
DDX39A-203ENST00000454233 LSM8O95777 96 aaKnown RBP11.05□□□□□ -0.64
DDX39A-203ENST00000454233 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms