RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 PRMT1Q99873 361 aaKnown RBP16.39■□□□□ 0.21
SNX17-204ENST00000453453 TTLL2Q9BWV7 592 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 ECT2Q9H8V3 914 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 GMIPQ9P107 970 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 WHRNQ9P202 907 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 UXTQ9UBK9 157 aaPredicted RBP16.39■□□□□ 0.21
SNX17-204ENST00000453453 CTNNAL1Q9UBT7 734 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 FBXW11Q9UKB1 542 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 USP18Q9UMW8 372 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 NAALADL1Q9UQQ1 740 aa16.39■□□□□ 0.21
SNX17-204ENST00000453453 A0A1W2PQH9 124 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 M0QYT0 321 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 UBOX5O94941 541 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 F9P00740 461 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 LRG1P02750 347 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 CAV1Q03135 178 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 DEUP1Q05D60 604 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 TAF10Q12962 218 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 TBC1D1Q86TI0 1168 aaPredicted RBP16.38■□□□□ 0.21
SNX17-204ENST00000453453 ELMOD1Q8N336 334 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 TEX9Q8N6V9 391 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 KREMEN2Q8NCW0 462 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 ARNTL2Q8WYA1 636 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 ALG3Q92685 438 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 RBM41Q96IZ5 413 aaKnown RBP16.38■□□□□ 0.21
SNX17-204ENST00000453453 TRIM31Q9BZY9 425 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 ZWILCHQ9H900 591 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 CERS4Q9HA82 394 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 PCSK1NQ9UHG2 260 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 DPP7Q9UHL4 492 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 RPL26L1Q9UNX3 145 aaKnown RBP16.38■□□□□ 0.21
SNX17-204ENST00000453453 SNX24Q9Y343 169 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 ASB3Q9Y575 518 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 ACTL7BQ9Y614 415 aa16.38■□□□□ 0.21
SNX17-204ENST00000453453 TRUB2O95900 331 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 KRT1P04264 644 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 SPATA31D3P0C874 917 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 CCNB1P14635 433 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 RPL21P46778 160 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 SLC25A11Q02978 314 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 SYPL2Q5VXT5 272 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 LILRA6Q6PI73 481 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 SPATA31D4Q6ZUB0 917 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 ASRGL1Q7L266 308 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 RTL10Q7L3V2 364 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 SCD5Q86SK9 330 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 PRELID2Q8N945 189 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 EXD1Q8NHP7 514 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 AGAP11Q8TF27 550 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 CKAP2Q8WWK9 683 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 NT5C3BQ969T7 300 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 TRMT2BQ96GJ1 504 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 CDK5RAP1Q96SZ6 601 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 OLA1Q9NTK5 396 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 ABCF3Q9NUQ8 709 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 PRKAG3Q9UGI9 489 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 CORO1CQ9ULV4 474 aaPredicted RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 NR2E1Q9Y466 385 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 COL4A4P53420 1690 aaPredicted RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 SYNJ2BP-COX16A0A087WUM0 186 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 ENDOD1O94919 500 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 FYNP06241 537 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 C8AP07357 584 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 RGS19P49795 217 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 HDAC4P56524 1084 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 IFI35P80217 286 aaPredicted RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 NME3Q13232 169 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 PARP6Q2NL67 630 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 ACCSLQ4AC99 568 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 CCDC38Q502W7 563 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 SPDYAQ5MJ70 313 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 SH3PXD2AQ5TCZ1 1133 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 CEP128Q6ZU80 1094 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 BZW1Q7L1Q6 419 aaKnown RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 SPATA21Q7Z572 469 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 RCOR2Q8IZ40 523 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 ARFGAP1Q8N6T3 406 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 TEKT4Q8WW24 435 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 MAIP1Q8WWC4 291 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 KLHL29Q96CT2 875 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 ZNF512Q96ME7 567 aaPredicted RBP16.37■□□□□ 0.21
SNX17-204ENST00000453453 LRRC4CQ9HCJ2 640 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 DDIT4Q9NX09 232 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 COX16Q9P0S2 106 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 LGALS13Q9UHV8 139 aa16.37■□□□□ 0.21
SNX17-204ENST00000453453 TLDC2A0PJX2 215 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 TCF4P15884 667 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 IRS1P35568 1242 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 COILP38432 576 aaPredicted RBP16.36■□□□□ 0.21
SNX17-204ENST00000453453 PPP3CCP48454 512 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 CLCN4P51793 760 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 SMAD3P84022 425 aaKnown RBP16.36■□□□□ 0.21
SNX17-204ENST00000453453 ZNF211Q13398 564 aaPredicted RBP16.36■□□□□ 0.21
SNX17-204ENST00000453453 CAMK1Q14012 370 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 C11orf91Q3C1V1 193 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 PPM1LQ5SGD2 360 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 ARMC2Q8NEN0 867 aa16.36■□□□□ 0.21
SNX17-204ENST00000453453 DQX1Q8TE96 717 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms