RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 KIF19Q2TAC6 998 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 TTC31Q49AM3 519 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 CCDC157Q569K6 752 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 FAM133BQ5BKY9 247 aaKnown RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 ANKRD40Q6AI12 368 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 MSANTD2Q6P1R3 559 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 C19orf48Q6RUI8 117 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 LRSAM1Q6UWE0 723 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 GLRX5Q86SX6 157 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 MFN1Q8IWA4 741 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 UBR7Q8N806 425 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 BAHD1Q8TBE0 780 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 MDM1Q8TC05 714 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 RHBDD1Q8TEB9 315 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 CLEC4CQ8WTT0 213 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 TFAP2BQ92481 460 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 SLC35C1Q96A29 364 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 PRICKLE1Q96MT3 831 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 BTBD1Q9H0C5 482 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 PCED1AQ9H1Q7 454 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 MTG2Q9H4K7 406 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 PRSS16Q9NQE7 514 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 TOR4AQ9NXH8 423 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 ARMCX3Q9UH62 379 aaPredicted RBP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 STOML2Q9UJZ1 356 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.15□□□□□ -0.46
GARNL3-210ENST00000453030 COQ4Q9Y3A0 265 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 ATP6V1DQ9Y5K8 247 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 KNTC1P50748 2209 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 MYLKQ15746 1914 aa12.15□□□□□ -0.46
GARNL3-210ENST00000453030 FAM47DPA6NHR8 397 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 KCNK3O14649 394 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 LTFP02788 710 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 ATP5BP06576 529 aaKnown RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 ATXN1LP0C7T5 689 aaKnown RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 BRD2P25440 801 aaKnown RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 SLC6A4P31645 630 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 SLC11A2P49281 568 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 FKBP3Q00688 224 aaKnown RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 TEAD4Q15561 434 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 ZNF658Q5TYW1 1059 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 PIK3R6Q5UE93 754 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 NUGGCQ68CJ6 796 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 ZNF776Q68DI1 518 aaPredicted RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 PMF1Q6P1K2 205 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 LCLAT1Q6UWP7 414 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 ADAT2Q7Z6V5 191 aaKnown RBP12.14□□□□□ -0.47
GARNL3-210ENST00000453030 MARCH9Q86YJ5 346 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 PPM1KQ8N3J5 372 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 GANCQ8TET4 914 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 KCTD13Q8WZ19 329 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 KAT5Q92993 513 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 BIRC7Q96CA5 298 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 NT5C1BQ96P26 610 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 FBRSQ9HAH7 460 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 ANKRD6Q9Y2G4 727 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 PCDHB4Q9Y5E5 795 aa12.14□□□□□ -0.47
GARNL3-210ENST00000453030 TYW5A2RUC4 315 aaKnown RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 ACSL4O60488 711 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 GABBR2O75899 941 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 MOCS2O96007 188 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 GRIA4P48058 902 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 FMO5P49326 533 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 CCT8P50990 548 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 TBX4P57082 545 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 RPS24P62847 133 aaKnown RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 ZBTB16Q05516 673 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 NADSYN1Q6IA69 706 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 KIAA0907Q7Z7F0 614 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 DHX40Q8IX18 779 aaKnown RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 CARNMT1Q8N4J0 409 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 HJURPQ8NCD3 748 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 MYEOVQ96EZ4 313 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 CDC6Q99741 560 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 ZSWIM1Q9BR11 485 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 MIS12Q9H081 205 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 GPSM3Q9Y4H4 160 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 PCDHGB2Q9Y5G2 931 aa12.13□□□□□ -0.47
GARNL3-210ENST00000453030 COL5A1P20908 1838 aaPredicted RBP12.13□□□□□ -0.47
GARNL3-210ENST00000453030 FAM149AA5PLN7 773 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 H0Y8X5 98 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 IRAK2O43187 625 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SIN3BO75182 1162 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 PAEPP09466 180 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 CD27P26842 260 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 CSKP41240 450 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 NUMBP49757 651 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 LRRC63Q05C16 580 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 CDH18Q13634 790 aa12.12□□□□□ -0.47
GARNL3-210ENST00000453030 SUZ12Q15022 739 aaKnown RBP12.12□□□□□ -0.47
GARNL3-210ENST00000453030 COL28A1Q2UY09 1125 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms