RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 SLC26A11Q86WA9 606 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 PSTKQ8IV42 348 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 DQX1Q8TE96 717 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 USP33Q8TEY7 942 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 MZB1Q8WU39 189 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 FAM193BQ96PV7 902 aaPredicted RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 LAMA2P24043 3122 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 CSH1P0DML2 217 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 CSH2P0DML3 217 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 SCTRP47872 440 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 NUMBP49757 651 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 SEMA5AQ13591 1074 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 ITIH4Q14624 930 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 DEFB115Q30KQ5 88 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 BTBD8Q5XKL5 378 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 BNIPLQ7Z465 357 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 STAMBPL1Q96FJ0 436 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 RMDN2Q96LZ7 410 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 FRMD8Q9BZ67 464 aaPredicted RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 IQCGQ9H095 443 aaKnown RBP12.12□□□□□ -0.47
VTA1-203ENST00000452973 CSNK1G1Q9HCP0 422 aa12.12□□□□□ -0.47
VTA1-203ENST00000452973 TDRD15B5MCY1 1934 aaKnown RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 M0QZQ0 153 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 SPAG6O75602 509 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 RPLP2P05387 115 aaKnown RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 F7P08709 466 aaPredicted RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 CST5P28325 142 aaPredicted RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 GRK4P32298 578 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 GPR15P49685 360 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 ACTN3Q08043 901 aaPredicted RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 OVGP1Q12889 678 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 PRKD1Q15139 912 aaPredicted RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 SLC24A5Q71RS6 500 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 ZNF598Q86UK7 904 aaKnown RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 BANPQ8N9N5 519 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 MCUQ8NE86 351 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 SUSD3Q96L08 255 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 EPAS1Q99814 870 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 DSEQ9UL01 958 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 CCDC78A2IDD5 438 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 DFFAO00273 331 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 F9P00740 461 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 TPSB2P20231 275 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 PAFAH1B3Q15102 231 aaKnown RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 MTFR1Q15390 333 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 TPSAB1Q15661 275 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 NOMO2Q5JPE7 1267 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 C4orf22Q6V702 233 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 DNAAF3Q8N9W5 541 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 GSDMBQ8TAX9 411 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 SLC9A7Q96T83 725 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 XAB2Q9HCS7 855 aaKnown RBP12.11□□□□□ -0.47
VTA1-203ENST00000452973 KLHL14Q9P2G3 628 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 FETUBQ9UGM5 382 aa12.11□□□□□ -0.47
VTA1-203ENST00000452973 A0A1W2PQ45 241 aaPredicted RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 A0A1W2PQY0 241 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 C9IYK1 514 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 OPHN1O60890 802 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 TADA2AO75478 443 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 SOAT2O75908 522 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 KRT37O76014 449 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 UBOX5O94941 541 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 ZWINTO95229 277 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 CYP11A1P05108 521 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 INHAP05111 366 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 SKIP12755 728 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 FDFT1P37268 417 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 PBX3P40426 434 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 GATMP50440 423 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 RASA2Q15283 850 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 PDK4Q16654 411 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 TTC31Q49AM3 519 aaPredicted RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 TTC39BQ5VTQ0 682 aaPredicted RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 PDZD4Q76G19 769 aaPredicted RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 OR52K1Q8NGK4 314 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 LINC01599Q8WXQ3 324 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 ZNF75CPQ92670 426 aaPredicted RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 ARL2BPQ9Y2Y0 163 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 ATXN2Q99700 1313 aaKnown RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 SDR42E2A6NKP2 422 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 COPEO14579 308 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 ZBTB24O43167 697 aaPredicted RBP12.1□□□□□ -0.47
VTA1-203ENST00000452973 TOMM70O94826 608 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 TSHRP16473 764 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 PTPN3P26045 913 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 HOXD10P28358 340 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 MAGEA6P43360 314 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 GLUD2P49448 558 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 CXCR3P49682 368 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 NKX3-2P78367 333 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 IRX4P78413 519 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 NTAN1Q96AB6 310 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 RGS18Q9NS28 235 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 SYBUQ9NX95 663 aa12.1□□□□□ -0.47
VTA1-203ENST00000452973 NT5C1B-RDH14C9J2C7 533 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms