RNA–Protein interactions for RNA: ENST00000452271.6

SBSN-201, Transcript of suprabasin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SBSN, Length 1,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBSN-201ENST00000452271 GPS1Q13098 491 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 CCDC38Q502W7 563 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 SPRED2Q7Z698 418 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 PIGWQ7Z7B1 504 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 ARHGAP18Q8N392 663 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 CASP10Q92851 521 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 ANLNQ9NQW6 1124 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.92■□□□□ 0.3
SBSN-201ENST00000452271 FNIP2Q9P278 1114 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 FBXW11Q9UKB1 542 aa16.92■□□□□ 0.3
SBSN-201ENST00000452271 LINC01553A4QN01 128 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 PRRG1O14668 218 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 SPATA31D3P0C874 917 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 ZSCAN5DPP0CG00 497 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 ADRA1BP35368 520 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 CXCR3P49682 368 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 LIG3P49916 1009 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 RNASEH2BQ5TBB1 312 aaKnown RBP16.91■□□□□ 0.3
SBSN-201ENST00000452271 FAM109BQ6ICB4 259 aaPredicted RBP16.91■□□□□ 0.3
SBSN-201ENST00000452271 SPATA31D4Q6ZUB0 917 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 PCGF5Q86SE9 256 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 GPR65Q8IYL9 337 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 P3H4Q92791 437 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 RNF34Q969K3 372 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 C9orf72Q96LT7 481 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 RNF157Q96PX1 679 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 PRMT1Q99873 361 aaKnown RBP16.91■□□□□ 0.3
SBSN-201ENST00000452271 C17orf80Q9BSJ5 609 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 PHACTR1Q9C0D0 580 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 WDCPQ9H6R7 721 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 RXFP1Q9HBX9 757 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 HSFX1Q9UBD0 423 aa16.91■□□□□ 0.3
SBSN-201ENST00000452271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 I6L893 689 aaPredicted RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 MSI1O43347 362 aaKnown RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 ARHGEF15O94989 841 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 IGLV3-25P01717 112 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ELF1P32519 619 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 MAGEA10P43363 369 aaPredicted RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 SHHQ15465 462 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ANKRD20A8PQ5CZ79 823 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 EFHC2Q5JST6 749 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 PSTKQ8IV42 348 aaKnown RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 MICALL1Q8N3F8 863 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 PCDH19Q8TAB3 1148 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ACTL9Q8TC94 416 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 TCF25Q9BQ70 676 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ZNF670Q9BS34 389 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 TMEM121Q9BTD3 319 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 TLR8Q9NR97 1041 aaKnown RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 COMMD8Q9NX08 183 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 SSX2IPQ9Y2D8 614 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 YIPF1Q9Y548 306 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 RANBP2P49792 3224 aaKnown RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 TMEM120BA0PK00 339 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ALOX15BO15296 676 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ETS1P14921 441 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 PECAM1P16284 738 aaPredicted RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 ALDH1A3P47895 512 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 ERVFC1P60507 584 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 OTUD4Q01804 1114 aaKnown RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 CREMQ03060 361 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 TDRPQ86YL5 185 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 PQLC3Q8N755 202 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 NTAN1Q96AB6 310 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 TKTL2Q9H0I9 626 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 SMOC2Q9H3U7 446 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 SAYSD1Q9NPB0 183 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 CTNNAL1Q9UBT7 734 aa16.9■□□□□ 0.3
SBSN-201ENST00000452271 FARP1Q9Y4F1 1045 aaPredicted RBP16.9■□□□□ 0.3
SBSN-201ENST00000452271 SGK1O00141 431 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 IRAK2O43187 625 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 TBX18O95935 607 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 GOT1P17174 413 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 DNAJB1P25685 340 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 COL4A4P53420 1690 aaPredicted RBP16.89■□□□□ 0.29
SBSN-201ENST00000452271 EIF4EBP2Q13542 120 aaPredicted RBP16.89■□□□□ 0.29
SBSN-201ENST00000452271 TFDP2Q14188 446 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 ARL13BQ3SXY8 428 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 CCDC121Q6ZUS5 278 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 LRRC34Q8IZ02 419 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 PRCCQ92733 491 aaPredicted RBP16.89■□□□□ 0.29
SBSN-201ENST00000452271 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 TTLL2Q9BWV7 592 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 PPCSQ9HAB8 311 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 MYO16Q9Y6X6 1858 aa16.89■□□□□ 0.29
SBSN-201ENST00000452271 APOC4-APOC2K7ER74 178 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 APOC2P02655 101 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 PSEN1P49768 467 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 AIF1P55008 147 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 SCAPQ12770 1279 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 TWF1Q12792 350 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 NR1H3Q13133 447 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 ITIH4Q14624 930 aa16.88■□□□□ 0.29
SBSN-201ENST00000452271 TTC31Q49AM3 519 aaPredicted RBP16.88■□□□□ 0.29
SBSN-201ENST00000452271 RNF187Q5TA31 235 aaPredicted RBP16.88■□□□□ 0.29
SBSN-201ENST00000452271 C1orf228Q6PIY5 440 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms