RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 RPS24P62847 133 aaKnown RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 ARID5AQ03989 594 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 DUOXA1Q1HG43 343 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 VWA3BQ502W6 1294 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 FNDC3BQ53EP0 1204 aaKnown RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 HSP90AA4PQ58FG1 418 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 MS4A13Q5J8X5 152 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 DAB2IPQ5VWQ8 1189 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 MBLAC2Q68D91 279 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 SLC47A2Q86VL8 602 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 PASD1Q8IV76 773 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 MFN1Q8IWA4 741 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 ZNF557Q8N988 423 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 FIBINQ8TAL6 211 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 SIPA1Q96FS4 1042 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 TOE1Q96GM8 510 aaKnown RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 PPP1R13BQ96KQ4 1090 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 SLC2A13Q96QE2 648 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 LHX5Q9H2C1 402 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 WSB2Q9NYS7 404 aaPredicted RBP12.94□□□□□ -0.34
CPSF4-208ENST00000452047 DACH1Q9UI36 760 aa12.94□□□□□ -0.34
CPSF4-208ENST00000452047 KMT2BQ9UMN6 2715 aaPredicted RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 NDUFS2O75306 463 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 MOCS2O96007 188 aaPredicted RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 CFIP05156 583 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 ATP5BP06576 529 aaKnown RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 GLI1P08151 1106 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 SERPINF2P08697 491 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 KCNA4P22459 653 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 PTK2Q05397 1052 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 KCNMA1Q12791 1236 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 NUMA1Q14980 2115 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 DCAF6Q58WW2 860 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 ZC3H12AQ5D1E8 599 aaKnown RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 N4BP2L1Q5TBK1 243 aaPredicted RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 OLFML1Q6UWY5 402 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 RABEPKQ7Z6M1 372 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 CACUL1Q86Y37 369 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 FAM71AQ8IYT1 594 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 ZNF366Q8N895 744 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 C1orf131Q8NDD1 294 aaKnown RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 OR2T3Q8NH03 318 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 CEP76Q8TAP6 659 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 PRCCQ92733 491 aaPredicted RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 MYO19Q96H55 970 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 BTN2A3PQ96KV6 586 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 DDX50Q9BQ39 737 aaKnown RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 FSCN3Q9NQT6 498 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 SAMSN1Q9NSI8 373 aaKnown RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 ASNSD1Q9NWL6 643 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 STIM2Q9P246 746 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 INTS6Q9UL03 887 aaKnown RBP12.93□□□□□ -0.34
CPSF4-208ENST00000452047 SLC6A14Q9UN76 642 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 PLA2G4CQ9UP65 541 aa12.93□□□□□ -0.34
CPSF4-208ENST00000452047 TYW5A2RUC4 315 aaKnown RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 HSF2BPO75031 334 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 LUC7L3O95232 432 aaKnown RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 APOEP02649 317 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 ERBB2P04626 1255 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 POLR2EP19388 210 aaKnown RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 PMLP29590 882 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 CSKP41240 450 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 MAPK8P45983 427 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 KCNJ12Q14500 433 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 PTPN20Q4JDL3 420 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 TCP11X2Q5H9J9 407 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 FSCBQ5H9T9 825 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 CT47A1Q5JQC4 288 aaPredicted RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 RAP1GAP2Q684P5 730 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 RBM43Q6ZSC3 357 aaKnown RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 FAM183BPQ6ZVS7 135 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 SLC26A9Q7LBE3 791 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 DEFB106AQ8N104 65 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 CFAP52Q8N1V2 620 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 CADM4Q8NFZ8 388 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 DNASE2BQ8WZ79 361 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 FOXJ1Q92949 421 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 TTC17Q96AE7 1141 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 GPR174Q9BXC1 333 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
CPSF4-208ENST00000452047 NFE2L3Q9Y4A8 694 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 FHOD1Q9Y613 1164 aa12.92□□□□□ -0.34
CPSF4-208ENST00000452047 MAP1BP46821 2468 aaKnown RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 KCNU1A8MYU2 1149 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 GIPC1O14908 333 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 GRAP2O75791 330 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CSRP1P21291 193 aaKnown RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 TACR2P21452 398 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 OXTRP30559 389 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 KRT9P35527 623 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 NOVA1P51513 510 aaKnown RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CDK17Q00537 523 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 GFPT1Q06210 699 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 CDH18Q13634 790 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 DRAP1Q14919 205 aaPredicted RBP12.91□□□□□ -0.34
CPSF4-208ENST00000452047 EFHC1Q5JVL4 640 aa12.91□□□□□ -0.34
CPSF4-208ENST00000452047 SYCP2LQ5T4T6 812 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms