RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 TBL1XO60907 577 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 HOXD9P28356 352 aaPredicted RBP22.48■■□□□ 1.19
C9orf3-208ENST00000451893 HOXD12P35452 270 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 GFPT1Q06210 699 aaPredicted RBP22.48■■□□□ 1.19
C9orf3-208ENST00000451893 FIGNQ5HY92 759 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 CHST9Q7L1S5 443 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 LRRC8AQ8IWT6 810 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 SCUBE3Q8IX30 993 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 AHI1Q8N157 1196 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 HDDC3Q8N4P3 179 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 CCDC112Q8NEF3 446 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 SORCS1Q8WY21 1168 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 FOXJ1Q92949 421 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 SIPA1Q96FS4 1042 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 ABCB8Q9NUT2 735 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 STIM2Q9P246 746 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 CLEC4EQ9ULY5 219 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 ZKSCAN5Q9Y2L8 839 aa22.48■■□□□ 1.19
C9orf3-208ENST00000451893 IRAK2O43187 625 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 KCNK5O95279 499 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 MOCS2O96007 188 aaPredicted RBP22.47■■□□□ 1.19
C9orf3-208ENST00000451893 APOEP02649 317 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 GNSP15586 552 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 CD6P30203 668 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 EXOC3L4Q17RC7 722 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 WDR45BQ5MNZ6 344 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 TRIM65Q6PJ69 517 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 TMPRSS6Q8IU80 811 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 MFN1Q8IWA4 741 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 ZSWIM1Q9BR11 485 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 EDEM3Q9BZQ6 932 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 TMEM74BQ9NUR3 256 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 SUSD2Q9UGT4 822 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 GGA2Q9UJY4 613 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 PILRBQ9UKJ0 227 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 SLC6A14Q9UN76 642 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 NCOR2Q9Y618 2525 aa22.47■■□□□ 1.19
C9orf3-208ENST00000451893 CNOT1A5YKK6 2376 aaKnown RBP22.46■■□□□ 1.19
C9orf3-208ENST00000451893 AKR1B15C9JRZ8 316 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-208ENST00000451893 ACSL4O60488 711 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 ATP5BP06576 529 aaKnown RBP22.46■■□□□ 1.19
C9orf3-208ENST00000451893 PABPC1P11940 636 aaKnown RBP22.46■■□□□ 1.19
C9orf3-208ENST00000451893 ENGP17813 658 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 POLR2EP19388 210 aaKnown RBP22.46■■□□□ 1.19
C9orf3-208ENST00000451893 RING1Q06587 406 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 DENND1BQ6P3S1 775 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 RFWD3Q6PCD5 774 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 SLC23A3Q6PIS1 610 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 CNGA4Q8IV77 575 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 HJURPQ8NCD3 748 aaPredicted RBP22.46■■□□□ 1.19
C9orf3-208ENST00000451893 P2RY11Q96G91 374 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 CNTNAP3BQ96NU0 1288 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 CNTNAP3Q9BZ76 1288 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 SLC32A1Q9H598 525 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 APEX2Q9UBZ4 518 aa22.46■■□□□ 1.19
C9orf3-208ENST00000451893 ADAMTS9Q9P2N4 1935 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 GTPBP10A4D1E9 387 aaKnown RBP22.45■■□□□ 1.18
C9orf3-208ENST00000451893 SYPP08247 313 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 PRKCHP24723 683 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 HLA-FP30511 346 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 OXTRP30559 389 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 GPD2P43304 727 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 ST8SIA6P61647 398 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 CDH18Q13634 790 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 N4BP2L1Q5TBK1 243 aaPredicted RBP22.45■■□□□ 1.18
C9orf3-208ENST00000451893 SH3PXD2AQ5TCZ1 1133 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 DQX1Q8TE96 717 aaKnown RBP22.45■■□□□ 1.18
C9orf3-208ENST00000451893 CYB5D2Q8WUJ1 264 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 ZNF606Q8WXB4 792 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 NOX5Q96PH1 765 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 TJP2Q9UDY2 1190 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 STOML2Q9UJZ1 356 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 ANGPTL2Q9UKU9 493 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 NAALADL1Q9UQQ1 740 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 TLR6Q9Y2C9 796 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 CEP83Q9Y592 693 aa22.45■■□□□ 1.18
C9orf3-208ENST00000451893 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.45■■□□□ 1.18
C9orf3-208ENST00000451893 GOLGA6L7A0A1B0GV03 622 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 TM4SF5O14894 197 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 HLA-EP13747 358 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 SLC9A1P19634 815 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 PLEKHG6Q3KR16 790 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 MBLAC2Q68D91 279 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 GJB7Q6PEY0 223 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 CARNMT1Q8N4J0 409 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 ADAM32Q8TC27 787 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 RNF34Q969K3 372 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 TOE1Q96GM8 510 aaKnown RBP22.44■■□□□ 1.18
C9orf3-208ENST00000451893 PANX2Q96RD6 677 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 GPR174Q9BXC1 333 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 IRX2Q9BZI1 471 aaPredicted RBP22.44■■□□□ 1.18
C9orf3-208ENST00000451893 MIR1-1HGQ9H1L0 117 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 PDCL3Q9H2J4 239 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 SYNCQ9H7C4 482 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 POPDC2Q9HBU9 364 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 CD93Q9NPY3 652 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 SLC12A6Q9UHW9 1150 aa22.44■■□□□ 1.18
C9orf3-208ENST00000451893 A0A1W2PQJ5 194 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 E5RJQ4 531 aa22.43■■□□□ 1.18
C9orf3-208ENST00000451893 MOCS3O95396 460 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms