RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 ASB2Q96Q27 587 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 CDX2Q99626 313 aaPredicted RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 C17orf80Q9BSJ5 609 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 QTRT1Q9BXR0 403 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 C1orf112Q9NSG2 853 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 LAS1LQ9Y4W2 734 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 ZDBF2Q9HCK1 2354 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 RTL9Q8NET4 1388 aa5.02□□□□□ -1.61
GTF3C3-207ENST00000451088 ABCC4O15439 1325 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 TRIM43BA6NCK2 446 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 MBD3L4A6NDZ8 208 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 MBD3L3A6NE82 208 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 ISM1B1AKI9 464 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 POC1B-GALNT4F8VUJ3 575 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 TP73O15350 636 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 MARCH6O60337 910 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 ECE2O60344 883 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 SGPL1O95470 568 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 VNN1O95497 513 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 DDX58O95786 925 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 TFRCP02786 760 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 MYCLP12524 364 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 BCAT1P54687 386 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 E2F1Q01094 437 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 AIMP1Q12904 312 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 GRAPQ13588 217 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 CCNIQ14094 377 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 LRRC41Q15345 812 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 PTCHD3Q3KNS1 767 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 SUPT20HL1Q3ZLR7 823 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 RNASE12Q5GAN4 147 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 L1TD1Q5T7N2 865 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 FCRL6Q6DN72 434 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 SLC18B1Q6NT16 456 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 APOA5Q6Q788 366 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 ZDHHC24Q6UX98 284 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 GALNT16Q8N428 558 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 GALNT4Q8N4A0 578 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 MAGEB6Q8N7X4 407 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 PNLDC1Q8NA58 520 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 AGBL3Q8NEM8 1001 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 GRAPLQ8TC17 118 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 U2AF1L4Q8WU68 220 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 RPL36ALQ969Q0 106 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 TRIM43Q96BQ3 446 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 PRR25Q96S07 402 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 EYA3Q99504 573 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 DPCDQ9BVM2 203 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 TRIM5Q9C035 493 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 ARHGAP39Q9C0H5 1083 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 MYOZ2Q9NPC6 264 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 NRIP3Q9NQ35 241 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 DNMT3BQ9UBC3 853 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 POLLQ9UGP5 575 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 ZMYND8Q9ULU4 1186 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 NOB1Q9ULX3 412 aaKnown RBP5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 CDY1Q9Y6F8 540 aa5.01□□□□□ -1.61
GTF3C3-207ENST00000451088 LAMA2P24043 3122 aaKnown RBP5□□□□□ -1.61
GTF3C3-207ENST00000451088 CACNA1BQ00975 2339 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 TCRBV5S1A1TA0A578 114 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 A6NNZ2 444 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 M0R3H8 397 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 CCP110O43303 1012 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 CHRM5P08912 532 aaPredicted RBP5□□□□□ -1.61
GTF3C3-207ENST00000451088 SFPQP23246 707 aaKnown RBP eCLIP5□□□□□ -1.61
GTF3C3-207ENST00000451088 FPR3P25089 353 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 GKP32189 559 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 RENBPP51606 427 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 PRMT2P55345 433 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 SUMO3P55854 103 aaPredicted RBP5□□□□□ -1.61
GTF3C3-207ENST00000451088 DPY19L3Q6ZPD9 716 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 SFTPA1Q8IWL2 248 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 CCDC146Q8IYE0 955 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 SPARTQ8N0X7 666 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 SIRT6Q8N6T7 355 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 Q8N9P0 234 aaPredicted RBP5□□□□□ -1.61
GTF3C3-207ENST00000451088 SPSB4Q96A44 273 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 PPP1R9BQ96SB3 815 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 SH2D3AQ9BRG2 576 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 CIPCQ9C0C6 399 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 BHMT2Q9H2M3 363 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 PRKRIP1Q9H875 184 aaPredicted RBP5□□□□□ -1.61
GTF3C3-207ENST00000451088 CHPF2Q9P2E5 772 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 CPNE7Q9UBL6 633 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 ZSWIM8A7E2V4 1837 aa5□□□□□ -1.61
GTF3C3-207ENST00000451088 SPTBN4Q9H254 2564 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 CYP2D7A0A087X1C5 515 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 PYCARD-AS1I3L0S3 204 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 AP4M1O00189 453 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 EXOC3O60645 756 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 PMPCBO75439 489 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 FGAP02671 866 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 KLRC1P26715 233 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 NEXNQ0ZGT2 675 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 KLF9Q13886 244 aaPredicted RBP4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 DAZAP2Q15038 168 aaPredicted RBP4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 PPP2R5AQ15172 486 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 INSCQ1MX18 579 aa4.99□□□□□ -1.61
GTF3C3-207ENST00000451088 CCDC152Q4G0S7 254 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms