RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 AVPR1AP37288 418 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 AUHQ13825 339 aaKnown RBP19.9■□□□□ 0.78
RPS28-202ENST00000449223 LLGL1Q15334 1064 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 CCNG2Q16589 344 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 FAM133BQ5BKY9 247 aaKnown RBP19.9■□□□□ 0.78
RPS28-202ENST00000449223 NADSYN1Q6IA69 706 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 DRICH1Q6PGQ1 229 aaPredicted RBP19.9■□□□□ 0.78
RPS28-202ENST00000449223 RFX6Q8HWS3 928 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 FAM217AQ8IXS0 508 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 MMGT1Q8N4V1 131 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 PABPC5Q96DU9 382 aaKnown RBP19.9■□□□□ 0.78
RPS28-202ENST00000449223 AP1M1Q9BXS5 423 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 SIK2Q9H0K1 926 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 ZNF510Q9Y2H8 683 aa19.9■□□□□ 0.78
RPS28-202ENST00000449223 DRGXA6NNA5 263 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 EFCAB8A8MWE9 144 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 APOL1O14791 398 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 NR2C2P49116 596 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 PAFAH1B3Q15102 231 aaKnown RBP19.89■□□□□ 0.77
RPS28-202ENST00000449223 ADGRF1Q5T601 910 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 NCBP2-AS2Q69YL0 99 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 ITFG1Q8TB96 612 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.89■□□□□ 0.77
RPS28-202ENST00000449223 TBC1D31Q96DN5 1066 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 LRCH3Q96II8 777 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 MSLNLQ96KJ4 702 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 GAS2L1Q99501 681 aaPredicted RBP19.89■□□□□ 0.77
RPS28-202ENST00000449223 SMPD4Q9NXE4 827 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 AGO1Q9UL18 857 aaKnown RBP19.89■□□□□ 0.77
RPS28-202ENST00000449223 SNX10Q9Y5X0 201 aa19.89■□□□□ 0.77
RPS28-202ENST00000449223 WASH4PA8MWX3 477 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 GFRA2O00451 464 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 PHF2O75151 1096 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 EPHB2P29323 1055 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 CHRNA3P32297 505 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 LTBRP36941 435 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 FNTAP49354 379 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 POTEHQ6S545 545 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 ADAT2Q7Z6V5 191 aaKnown RBP19.88■□□□□ 0.77
RPS28-202ENST00000449223 DENND1CQ8IV53 801 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 LRRN4CLQ8ND94 238 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 USP13Q92995 863 aaPredicted RBP19.88■□□□□ 0.77
RPS28-202ENST00000449223 WBP2Q969T9 261 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 TDP1Q9NUW8 608 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 GDE1Q9NZC3 331 aa19.88■□□□□ 0.77
RPS28-202ENST00000449223 R3HDM2Q9Y2K5 976 aaKnown RBP19.88■□□□□ 0.77
RPS28-202ENST00000449223 E2F8A0AVK6 867 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 ERCC2P18074 760 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 TACR2P21452 398 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 AMPD1P23109 780 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 FSHRP23945 695 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 GGCXP38435 758 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 DLX2Q07687 328 aaPredicted RBP19.87■□□□□ 0.77
RPS28-202ENST00000449223 NOMO1Q15155 1222 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 FBXL22Q6P050 247 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 LRRC31Q6UY01 552 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 C14orf80Q86SX3 495 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 NPAS3Q8IXF0 933 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 SLC35B2Q8TB61 432 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 NKD2Q969F2 451 aaPredicted RBP19.87■□□□□ 0.77
RPS28-202ENST00000449223 DDX50Q9BQ39 737 aaKnown RBP19.87■□□□□ 0.77
RPS28-202ENST00000449223 CATSPERBQ9H7T0 1116 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 KIF9Q9HAQ2 790 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 ETNK2Q9NVF9 386 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 DONSONQ9NYP3 566 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 STIM2Q9P246 746 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 PCYOX1Q9UHG3 505 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 LSM7Q9UK45 103 aaKnown RBP19.87■□□□□ 0.77
RPS28-202ENST00000449223 RAD54BQ9Y620 910 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 DOCK8Q8NF50 2099 aa19.87■□□□□ 0.77
RPS28-202ENST00000449223 LEFTY2O00292 366 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 C2orf54Q08AI8 447 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 USP4Q13107 963 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 RAP1GAP2Q684P5 730 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CES5AQ6NT32 575 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 NLRP14Q86W24 1093 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CHSY1Q86X52 802 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CPXM2Q8N436 756 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 NOA1Q8NC60 698 aaKnown RBP19.86■□□□□ 0.77
RPS28-202ENST00000449223 ACTL9Q8TC94 416 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 SLCO2A1Q92959 643 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 ZSWIM3Q96MP5 696 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 RUNDC3BQ96NL0 473 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 SLITRK6Q9H5Y7 841 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CLDND1Q9NY35 253 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 VANGL2Q9ULK5 521 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 BRWD1Q9NSI6 2320 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 CHD5Q8TDI0 1954 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 F5H5T6 163 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 DAPK3O43293 454 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 LIASO43766 372 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 IRF1P10914 325 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 PECAM1P16284 738 aaPredicted RBP19.86■□□□□ 0.77
RPS28-202ENST00000449223 RHOQP17081 205 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 SLC6A4P31645 630 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 DYNLT1P63172 113 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 OTUD4Q01804 1114 aaKnown RBP19.86■□□□□ 0.77
RPS28-202ENST00000449223 ZNF77Q15935 545 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 ATAT1Q5SQI0 421 aa19.86■□□□□ 0.77
RPS28-202ENST00000449223 TMCO3Q6UWJ1 677 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms