RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 USP36Q9P275 1121 aaKnown RBP20.43■□□□□ 0.86
VCP-203ENST00000448530 TJP2Q9UDY2 1190 aa20.43■□□□□ 0.86
VCP-203ENST00000448530 KCNJ18B7U540 433 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 FOXN3O00409 490 aaPredicted RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 GLI1P08151 1106 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 SLC2A3P11169 496 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 HLA-EP13747 358 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 ENGP17813 658 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 CD70P32970 193 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 MAPK8P45983 427 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 ST8SIA6P61647 398 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 RAPGEF1Q13905 1077 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 KCNJ12Q14500 433 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 ZC3H12AQ5D1E8 599 aaKnown RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 MS4A13Q5J8X5 152 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 WDR45BQ5MNZ6 344 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 PEAR1Q5VY43 1037 aaPredicted RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 CLEC17AQ6ZS10 378 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 KIAA0907Q7Z7F0 614 aaPredicted RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 CACUL1Q86Y37 369 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 SLC41A1Q8IVJ1 513 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 ATP6V0D2Q8N8Y2 350 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 OR2T3Q8NH03 318 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 FIBINQ8TAL6 211 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 RNF34Q969K3 372 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 TOE1Q96GM8 510 aaKnown RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 ZNF419Q96HQ0 510 aaPredicted RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 BTN2A3PQ96KV6 586 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 PRICKLE1Q96MT3 831 aaPredicted RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 GBP4Q96PP9 640 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 CPXM1Q96SM3 734 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 NUCKS1Q9H1E3 243 aaKnown RBP20.42■□□□□ 0.86
VCP-203ENST00000448530 SUSD2Q9UGT4 822 aa20.42■□□□□ 0.86
VCP-203ENST00000448530 MEI4A8MW99 385 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 CDX4O14627 284 aaPredicted RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 HSF2BPO75031 334 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 KCNK5O95279 499 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 SERPINF2P08697 491 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 GNSP15586 552 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 TPMTP51580 245 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 RPS24P62847 133 aaKnown RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 CAMK2GQ13555 558 aaPredicted RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 MIIPQ5JXC2 388 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 OR6B2Q6IFH4 312 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 PSAPL1Q6NUJ1 521 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 C11orf57Q6ZUT1 292 aaPredicted RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 CHSY1Q86X52 802 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 LGI2Q8N0V4 545 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 WDTC1Q8N5D0 677 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 C1orf131Q8NDD1 294 aaKnown RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 WFDC5Q8TCV5 224 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 NUP58Q9BVL2 599 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 GTPBP2Q9BX10 602 aaKnown RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 GPR174Q9BXC1 333 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 TMEM245Q9H330 911 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 FBRSQ9HAH7 460 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.41■□□□□ 0.86
VCP-203ENST00000448530 ASNSD1Q9NWL6 643 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 WSB2Q9NYS7 404 aaPredicted RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 SUN2Q9UH99 717 aa20.41■□□□□ 0.86
VCP-203ENST00000448530 AJAP1Q9UKB5 411 aaPredicted RBP20.41■□□□□ 0.86
VCP-203ENST00000448530 SYNJ2BP-COX16A0A087WUM0 186 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 H0Y626 953 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 MOCS3O95396 460 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 ABCB4P21439 1286 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 EEF1GP26641 437 aaKnown RBP20.4■□□□□ 0.86
VCP-203ENST00000448530 NOVA1P51513 510 aaKnown RBP20.4■□□□□ 0.86
VCP-203ENST00000448530 COPAP53621 1224 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 TAF5Q15542 800 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 RAP1GAP2Q684P5 730 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 SLC47A2Q86VL8 602 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 FAM71AQ8IYT1 594 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 DEFB106AQ8N104 65 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 CFAP52Q8N1V2 620 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 ZNF366Q8N895 744 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 SAMSN1Q9NSI8 373 aaKnown RBP20.4■□□□□ 0.86
VCP-203ENST00000448530 LMBRD1Q9NUN5 540 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 DDIT4Q9NX09 232 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 COX16Q9P0S2 106 aa20.4■□□□□ 0.86
VCP-203ENST00000448530 ADAMTS9Q9P2N4 1935 aa20.39■□□□□ 0.86
VCP-203ENST00000448530 F5H5T6 163 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 LUC7L3O95232 432 aaKnown RBP20.39■□□□□ 0.85
VCP-203ENST00000448530 IGLV3-25P01717 112 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 ASLP04424 464 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 TPM2P07951 284 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 SYPP08247 313 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 PNMA6AP0CW24 399 aaPredicted RBP20.39■□□□□ 0.85
VCP-203ENST00000448530 TACR2P21452 398 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 CCR1P32246 355 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 CLCN1P35523 988 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 DRAP1Q14919 205 aaPredicted RBP20.39■□□□□ 0.85
VCP-203ENST00000448530 PTPRNQ16849 979 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 TCP11X2Q5H9J9 407 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 N4BP2L1Q5TBK1 243 aaPredicted RBP20.39■□□□□ 0.85
VCP-203ENST00000448530 HDDC3Q8N4P3 179 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 CADM4Q8NFZ8 388 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 KIAA1522Q9P206 1035 aaPredicted RBP20.39■□□□□ 0.85
VCP-203ENST00000448530 NFE2L3Q9Y4A8 694 aa20.39■□□□□ 0.85
VCP-203ENST00000448530 MUC22E2RYF6 1773 aaPredicted RBP20.39■□□□□ 0.85
VCP-203ENST00000448530 KCNU1A8MYU2 1149 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms