RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 SLC30A5Q8TAD4 765 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 FIBINQ8TAL6 211 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 RNF34Q969K3 372 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 NT5C3BQ969T7 300 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 LOXL4Q96JB6 756 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 LMLNQ96KR4 655 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 PRMT1Q99873 361 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 ARRDC1-AS1Q9H2J1 176 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.2□□□□□ -0.36e-9■■□□□ 13.2
PRPF40A-203ENST00000448428 SLC12A6Q9UHW9 1150 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 GGA2Q9UJY4 613 aa13.2□□□□□ -0.3
PRPF40A-203ENST00000448428 CKAP5Q14008 2032 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 GOLGA8SH3BPF8 625 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 RHOBTB1O94844 696 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 NDUFV2P19404 249 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 PTMSP20962 102 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 ABCB4P21439 1286 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 P2RY2P41231 377 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 E2F5Q15329 346 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 MAP7D1Q3KQU3 841 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 FILIP1LQ4L180 1135 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 FSCBQ5H9T9 825 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 MBLAC2Q68D91 279 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 TRNP1Q6NT89 227 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 MMS22LQ6ZRQ5 1243 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 CHSY1Q86X52 802 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 MFN1Q8IWA4 741 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 CARNMT1Q8N4J0 409 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 MSANTD4Q8NCY6 345 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 CYB5D2Q8WUJ1 264 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 CBX8Q9HC52 389 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 PIGVQ9NUD9 493 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 RRN3Q9NYV6 651 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 MBD1Q9UIS9 605 aaPredicted RBP13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 TMEM59LQ9UK28 342 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 USP18Q9UMW8 372 aa13.19□□□□□ -0.3
PRPF40A-203ENST00000448428 A0A1B0GTH6 734 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 TYW5A2RUC4 315 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 LRP3O75074 770 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PAGE1O75459 146 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 EPN2O95208 641 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 UNGP13051 313 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 MMP8P22894 467 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PRKCHP24723 683 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 FLT3P36888 993 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 CXCR3P49682 368 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 SULT1E1P49888 294 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 LMAN2Q12907 356 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 BYSLQ13895 437 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 NR1I3Q14994 352 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 ELF2Q15723 593 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 CCDC6Q16204 474 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 CSRP2Q16527 193 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PTPRNQ16849 979 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 SLC25A52Q3SY17 297 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 FUT11Q495W5 492 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PMS2CLQ68D20 193 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 IRF2BP2Q7Z5L9 587 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PHLDB2Q86SQ0 1253 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 LUZP1Q86V48 1076 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 C11orf74Q86VG3 221 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 ZNF557Q8N988 423 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PGAP3Q96FM1 320 aaPredicted RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 MRGPRX1Q96LB2 322 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 TBCBQ99426 244 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 AGPAT1Q99943 283 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 ANLNQ9NQW6 1124 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 SEMA4GQ9NTN9 838 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 INTS6Q9UL03 887 aaKnown RBP13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 STAP1Q9ULZ2 295 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 PLA2G4CQ9UP65 541 aa13.18□□□□□ -0.3
PRPF40A-203ENST00000448428 MUC22E2RYF6 1773 aaPredicted RBP13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 F5H5T6 163 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 H0Y626 953 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 MAP3K13O43283 966 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 ADCY5O95622 1261 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 ATP5BP06576 529 aaKnown RBP13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 DLDP09622 509 aaKnown RBP13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 HLA-EP13747 358 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 FERP16591 822 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 CDH18Q13634 790 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 AUHQ13825 339 aaKnown RBP13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 STARD3Q14849 445 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 CLEC16AQ2KHT3 1053 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 FBXL22Q6P050 247 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 SERPINA13PQ6UXR4 307 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 ARCQ7LC44 396 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 C14orf80Q86SX3 495 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 BAP1Q92560 729 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 IGSF8Q969P0 613 aa13.17□□□□□ -0.3
PRPF40A-203ENST00000448428 TTC17Q96AE7 1141 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms