RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 CNPY4Q8N129 248 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 ALLCQ8N6M5 410 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 GBP7Q8N8V2 638 aaPredicted RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 DTWD2Q8NBA8 298 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 AFG1LQ8WV93 481 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 ATXN2LQ8WWM7 1075 aaKnown RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 ARHGEF2Q92974 986 aaKnown RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 ACSF2Q96CM8 615 aaPredicted RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 GRAMD1AQ96CP6 724 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 TMEM176AQ96HP8 235 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 SGSM3Q96HU1 749 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 SEC16BQ96JE7 1060 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 FGD4Q96M96 766 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 ACAP3Q96P50 834 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 TSPAN18Q96SJ8 248 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 RBM15Q96T37 977 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 FRMD8Q9BZ67 464 aaPredicted RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 GPR62Q9BZJ7 368 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 TRIM7Q9C029 511 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 XYLT2Q9H1B5 865 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 TRIT1Q9H3H1 467 aaKnown RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 RABEP2Q9H5N1 569 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 RSAD1Q9HA92 442 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 PLEKHA5Q9HAU0 1116 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 IFT122Q9HBG6 1241 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 SPON1Q9HCB6 807 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 TXNRD2Q9NNW7 524 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 GCM1Q9NP62 436 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 PARD6AQ9NPB6 346 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 ASNSD1Q9NWL6 643 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 SLC5A4Q9NY91 659 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 NINJ2Q9NZG7 142 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 FETUBQ9UGM5 382 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 DDX20Q9UHI6 824 aaKnown RBP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 SLC24A2Q9UI40 661 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.23□□□□□ -1.73
PTPN12-208ENST00000447995 AKT3Q9Y243 479 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 NEU2Q9Y3R4 380 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 LRRC37A2A6NM11 1700 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 WDR81Q562E7 1941 aa4.23□□□□□ -1.73
PTPN12-208ENST00000447995 A0A087WZ62 844 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 EXOC1LA0A1B0GW35 172 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 TMEM120BA0PK00 339 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 FITM1A5D6W6 292 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 RRN3P2A6NIE6 340 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 F8VP50 259 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 PI4K2BG5E9Z4 385 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 APOC4-APOC2K7ER74 178 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 O00370 1275 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 MCF2LO15068 1137 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 B4GALT5O43286 388 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 PEX10O60683 326 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 CILPO75339 1184 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 SPAG6O75602 509 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 ZNF189O75820 626 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 TOMM70O94826 608 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 SUN1O94901 812 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 APOC2P02655 101 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 ERBB2P04626 1255 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 ITGB3P05106 788 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 GSTA1P08263 222 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 INSRRP14616 1297 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 BRAFP15056 766 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 GPD1P21695 349 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 KDELR1P24390 212 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 STIP1P31948 543 aaKnown RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 GBP2P32456 591 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 STX2P32856 288 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 EPHX2P34913 555 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 CHKAP35790 457 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 CDKN2BP42772 138 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 SLCO1A2P46721 670 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 GABRB2P47870 512 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 LIG3P49916 1009 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 GTF2A2P52657 109 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 ZNF143P52747 638 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 SLC18A1P54219 525 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 YARSP54577 528 aaKnown RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 RAD23BP54727 409 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 OSTNP61366 133 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 RPL7AP62424 266 aaKnown RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 IGBP1P78318 339 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 IFI35P80217 286 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 IL9RQ01113 521 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 SLC25A11Q02978 314 aaKnown RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 ACTN3Q08043 901 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 GPS1Q13098 491 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 IFT88Q13099 833 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 MOGSQ13724 837 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 PDK2Q15119 407 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 NR0B2Q15466 257 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 TRIP13Q15645 432 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 OASLQ15646 514 aaKnown RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 CCDC85BQ15834 202 aaPredicted RBP4.22□□□□□ -1.73
PTPN12-208ENST00000447995 TAZQ16635 292 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 KYNUQ16719 465 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 LONRF1Q17RB8 773 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 KLHL38Q2WGJ6 581 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 PTPN20Q4JDL3 420 aa4.22□□□□□ -1.73
PTPN12-208ENST00000447995 ZNF394Q53GI3 561 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms