RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 FSCBQ5H9T9 825 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 MS4A13Q5J8X5 152 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 CLEC17AQ6ZS10 378 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 PASD1Q8IV76 773 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 AHI1Q8N157 1196 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 CFAP52Q8N1V2 620 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 OR2T3Q8NH03 318 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 FIBINQ8TAL6 211 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 PRCCQ92733 491 aaPredicted RBP21.53■■□□□ 1.04
SDC1-205ENST00000447124 NDST4Q9H3R1 872 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 PCDHGC3Q9UN70 934 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 PLA2G4CQ9UP65 541 aa21.53■■□□□ 1.04
SDC1-205ENST00000447124 MOCS2O96007 188 aaPredicted RBP21.52■■□□□ 1.04
SDC1-205ENST00000447124 SERPINF2P08697 491 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 DLDP09622 509 aaKnown RBP21.52■■□□□ 1.04
SDC1-205ENST00000447124 C7P10643 843 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 MAPK8P45983 427 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 FNDC3BQ53EP0 1204 aaKnown RBP21.52■■□□□ 1.04
SDC1-205ENST00000447124 DCAF6Q58WW2 860 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 PSAPL1Q6NUJ1 521 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 SLC47A2Q86VL8 602 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 DEFB106AQ8N104 65 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 CEP76Q8TAP6 659 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 TTC17Q96AE7 1141 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 PPP1R13BQ96KQ4 1090 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 DDX50Q9BQ39 737 aaKnown RBP21.52■■□□□ 1.04
SDC1-205ENST00000447124 TUBGCP2Q9BSJ2 902 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 GPR174Q9BXC1 333 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 NUP62CLQ9H1M0 184 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 LHX5Q9H2C1 402 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 MTG2Q9H4K7 406 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 PRSS16Q9NQE7 514 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 SAMSN1Q9NSI8 373 aaKnown RBP21.52■■□□□ 1.04
SDC1-205ENST00000447124 CACNA1EQ15878 2313 aa21.52■■□□□ 1.04
SDC1-205ENST00000447124 NUMA1Q14980 2115 aa21.52■■□□□ 1.03
SDC1-205ENST00000447124 IGLV3-19P01714 112 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 PMLP29590 882 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 NOVA1P51513 510 aaKnown RBP21.51■■□□□ 1.03
SDC1-205ENST00000447124 PTK2Q05397 1052 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 SH3PXD2AQ5TCZ1 1133 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 MMS22LQ6ZRQ5 1243 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 CACUL1Q86Y37 369 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 MFN1Q8IWA4 741 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 FAM71AQ8IYT1 594 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 HJURPQ8NCD3 748 aaPredicted RBP21.51■■□□□ 1.03
SDC1-205ENST00000447124 MYO19Q96H55 970 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 SLC2A13Q96QE2 648 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 KNL1Q8NG31 2342 aa21.51■■□□□ 1.03
SDC1-205ENST00000447124 CHD8Q9HCK8 2581 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 GRAP2O75791 330 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 PRKCSHP14314 528 aaPredicted RBP21.5■■□□□ 1.03
SDC1-205ENST00000447124 POLR2EP19388 210 aaKnown RBP21.5■■□□□ 1.03
SDC1-205ENST00000447124 RAP1GAP2Q684P5 730 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 FAM114A1Q8IWE2 563 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 RGL4Q8IZJ4 473 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 LGI2Q8N0V4 545 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 CARNMT1Q8N4J0 409 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 C1orf131Q8NDD1 294 aaKnown RBP21.5■■□□□ 1.03
SDC1-205ENST00000447124 OR2I1PQ8NGU4 316 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 DNASE2BQ8WZ79 361 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 FOXJ1Q92949 421 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 MRGPRX3Q96LB0 322 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 PLCB1Q9NQ66 1216 aa21.5■■□□□ 1.03
SDC1-205ENST00000447124 ADAMTS9Q9P2N4 1935 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 METTL12A8MUP2 240 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 KCNU1A8MYU2 1149 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 ERBB2P04626 1255 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 ATP5BP06576 529 aaKnown RBP21.49■■□□□ 1.03
SDC1-205ENST00000447124 CSRP1P21291 193 aaKnown RBP21.49■■□□□ 1.03
SDC1-205ENST00000447124 TACR2P21452 398 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 OXTRP30559 389 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 CSKP41240 450 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 GFPT1Q06210 699 aaPredicted RBP21.49■■□□□ 1.03
SDC1-205ENST00000447124 SMYD5Q6GMV2 418 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 FAM183BPQ6ZVS7 135 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 CADM4Q8NFZ8 388 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 PRMT1Q99873 361 aaKnown RBP21.49■■□□□ 1.03
SDC1-205ENST00000447124 TRIM62Q9BVG3 475 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 NUP58Q9BVL2 599 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 GTPBP2Q9BX10 602 aaKnown RBP21.49■■□□□ 1.03
SDC1-205ENST00000447124 ASNSD1Q9NWL6 643 aa21.49■■□□□ 1.03
SDC1-205ENST00000447124 EPG5Q9HCE0 2579 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 ARHGAP33O14559 1287 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 LUC7L3O95232 432 aaKnown RBP21.48■■□□□ 1.03
SDC1-205ENST00000447124 APOEP02649 317 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 GLI1P08151 1106 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 ACADMP11310 421 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 CTSOP43234 321 aaPredicted RBP21.48■■□□□ 1.03
SDC1-205ENST00000447124 RPS14P62263 151 aaKnown RBP21.48■■□□□ 1.03
SDC1-205ENST00000447124 CDK17Q00537 523 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 KCNJ12Q14500 433 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 DRAP1Q14919 205 aaPredicted RBP21.48■■□□□ 1.03
SDC1-205ENST00000447124 PTPN20Q4JDL3 420 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 EFHC1Q5JVL4 640 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 SYCP2LQ5T4T6 812 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 KLHDC7AQ5VTJ3 777 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 OR6B2Q6IFH4 312 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 OLFML1Q6UWY5 402 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 FAM124AQ86V42 546 aa21.48■■□□□ 1.03
SDC1-205ENST00000447124 DEFB124Q8NES8 71 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms