RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 ALDH18A1P54886 795 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 DDR1Q08345 913 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ZNHIT3Q15649 155 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 GRAMD4Q6IC98 578 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 PSRC1Q6PGN9 363 aaPredicted RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 GPAMQ9HCL2 828 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ZNF232Q9UNY5 417 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 SGPL1O95470 568 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 PGAM1P18669 254 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 TTPAP49638 278 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 DNAJC3Q13217 504 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 NEK5Q6P3R8 708 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 C16orf87Q6PH81 154 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 KSR1Q8IVT5 923 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 COLGALT1Q8NBJ5 622 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 HIPK4Q8NE63 616 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ZYG11BQ9C0D3 744 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 HIPK3Q9H422 1215 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ZCCHC17Q9NP64 241 aaKnown RBP8.74□□□□□ -1.01
PTPN3-204ENST00000446349 ADAM21Q9UKJ8 722 aa8.74□□□□□ -1.01
PTPN3-204ENST00000446349 H7C0S8 307 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FOXN1O15353 648 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 APODP05090 189 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 TSHRP16473 764 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 HDCP19113 662 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 NEK2P51955 445 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 SLC12A3P55017 1021 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CHRNB3Q05901 458 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 DYNC1I2Q13409 638 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 NCF4Q15080 339 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CCNI2Q6ZMN8 369 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 STRA8Q7Z7C7 330 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FAIM2Q9BWQ8 316 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FAM126AQ9BYI3 521 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 THAP2Q9H0W7 228 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 ADAM30Q9UKF2 790 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 HPSEQ9Y251 543 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 UBIAD1Q9Y5Z9 338 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FAM205CA6NFA0 338 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CYTH3O43739 400 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CTDNEP1O95476 244 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 COPAP53621 1224 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 DEFA1P59665 94 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 DEFA3P59666 94 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 OTUD4Q01804 1114 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 TEAD4Q15561 434 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 C11orf96Q7Z7L8 435 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 APLFQ8IW19 511 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 BTN2A2Q8WVV5 523 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 HTR3CQ8WXA8 447 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 JADE3Q92613 823 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CNGB3Q9NQW8 809 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CACNB4O00305 520 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 ALBP02768 609 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FDPSP14324 419 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 SKIV2L2P42285 1042 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 ADRM1Q16186 407 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 SYCP2LQ5T4T6 812 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 LRRC38Q5VT99 294 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FBXO38Q6PIJ6 1188 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CENPLQ8N0S6 344 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 EME1Q96AY2 570 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 KPNA3O00505 521 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FGBP02675 491 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CYP3A5P20815 502 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 GP5P40197 560 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 POU5F1Q01860 360 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 MCOLN2Q8IZK6 566 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 TAS1R2Q8TE23 839 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 AKT1S1Q96B36 256 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 LRRC1Q9BTT6 524 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 THUMPD3Q9BV44 507 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 IGFLR1Q9H665 355 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 PARVBQ9HBI1 364 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 PCNAP12004 261 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 ATP6V1C1P21283 382 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 GRM5P41594 1212 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CCT8P50990 548 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 FAM131BQ86XD5 332 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 RMND5BQ96G75 393 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CYLDQ9NQC7 956 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 LRRC4BQ9NT99 713 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 KIAA1522Q9P206 1035 aaPredicted RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 MRTO4Q9UKD2 239 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CCDC88AQ3V6T2 1871 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 MYO1GB0I1T2 1018 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 TRIM49D1C9J1S8 452 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 RGS14O43566 566 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 NDUFB5O43674 189 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 SGO1Q5FBB7 561 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 CYP20A1Q6UW02 462 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 C16orf62Q7Z3J2 963 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 PLD3Q8IV08 490 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 NKAPQ8N5F7 415 aaKnown RBP8.73□□□□□ -1.01
PTPN3-204ENST00000446349 IL17RAQ96F46 866 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 TBL1YQ9BQ87 522 aa8.73□□□□□ -1.01
PTPN3-204ENST00000446349 TBC1D30Q9Y2I9 924 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms