RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 TEX13BQ9BXU2 312 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 RIBC2Q9H4K1 309 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TFEBP19484 476 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 RGS7P49802 495 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CARTPTQ16568 116 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TMEM179Q6ZVK1 233 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 SULF1Q8IWU6 871 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PLEKHA8Q96JA3 519 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PNPLA8Q9NP80 782 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ITM2AO43736 263 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CLPXO76031 633 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 GRIK1P39086 918 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 THAP5Q7Z6K1 395 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 HPS6Q86YV9 775 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CNPY3Q9BT09 278 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 YTHDF1Q9BYJ9 559 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 MPP6Q9NZW5 540 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 RUVBL2Q9Y230 463 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PCP4L1A6NKN8 68 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 DGCR6Q14129 220 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 LDLRAP1Q5SW96 308 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 AMER2Q8N7J2 671 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TMC2Q8TDI7 906 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ING4Q9UNL4 249 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ERVK-10P10266 1014 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TUFMP49411 452 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 PPM1LQ5SGD2 360 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TMC7Q7Z402 723 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 SVOPQ8N4V2 548 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 POLE3Q9NRF9 147 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 SLC13A4Q9UKG4 626 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CTC1Q2NKJ3 1217 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 BBS12Q6ZW61 710 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 IL17RBQ9NRM6 502 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TRMT13Q9NUP7 481 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 PSME2Q9UL46 239 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PNMA8BQ9ULN7 279 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 ACOT9Q9Y305 439 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 A0A0J9YVX5 310 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TTLL12Q14166 644 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 SFT2D3Q587I9 215 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PTAR1Q7Z6K3 402 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 DSELQ8IZU8 1212 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 STX19Q8N4C7 294 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 OR6B3Q8NGW1 331 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TAS2R1Q9NYW7 299 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CCDC59Q9P031 241 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 COL3A1P02461 1466 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 CCDC78A2IDD5 438 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PARNO95453 639 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 AVPR1AP37288 418 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 NR2C2P49116 596 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 JAM2P57087 298 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ECT2LQ008S8 904 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 PEX6Q13608 980 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CCDC142Q17RM4 750 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 NRKQ7Z2Y5 1582 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CRHR1P34998 444 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 CYP1B1Q16678 543 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ZC3H12AQ5D1E8 599 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 MAGEE2Q8TD90 523 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 TOPORSQ9NS56 1045 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 OXSR1O95747 527 aaPredicted RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 RPL22P35268 128 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 ACOT2P49753 483 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 MTMR1Q13613 665 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 MAPRE1Q15691 268 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 MTERF2Q49AM1 385 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 TTC23Q5W5X9 447 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 FASTKD5Q7L8L6 764 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 KRT73Q86Y46 540 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 ZFP28Q8NHY6 868 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 MRPL4Q9BYD3 311 aaKnown RBP8.05□□□□□ -1.12
SMG1-202ENST00000446231 ROGDIQ9GZN7 287 aa8.05□□□□□ -1.12
SMG1-202ENST00000446231 RGS5O15539 181 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 HALP42357 657 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CDH15P55291 814 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 IL31Q6EBC2 164 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 TLK2Q86UE8 772 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 USP18Q9UMW8 372 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 FNDC3AQ9Y2H6 1198 aaKnown RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 ENTPD1P49961 510 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ATAD3BQ5T9A4 648 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 FAM160B2Q86V87 743 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 CNTD1Q8N815 330 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ITFG1Q8TB96 612 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 GABBR1Q9UBS5 961 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 GRIA4P48058 902 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 GSSP48637 474 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 MYLK3Q32MK0 819 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 AGAP9Q5VTM2 703 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 ANKRD23Q86SG2 305 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 KCTD10Q9H3F6 313 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 SMARCAD1Q9H4L7 1026 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 PPATQ06203 517 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 PLCL1Q15111 1095 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 EBNA1BP2Q99848 306 aaKnown RBP8.04□□□□□ -1.12
SMG1-202ENST00000446231 HPS4Q9NQG7 708 aa8.04□□□□□ -1.12
SMG1-202ENST00000446231 A0A096LPK6 155 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms