RNA–Protein interactions for RNA: ENST00000446046.5

FN1-212, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-212ENST00000446046 TBC1D14Q9P2M4 693 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 GIT1Q9Y2X7 761 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 NOS3P29474 1203 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 NOS2P35228 1153 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 MMP13P45452 471 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 CRYBB1P53674 252 aaPredicted RBP11.98□□□□□ -0.49
FN1-212ENST00000446046 CYTH1Q15438 398 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 SLC39A12Q504Y0 691 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 C11orf63Q6NUN7 778 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 CEP68Q76N32 757 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 BEND7Q8N7W2 519 aaPredicted RBP11.98□□□□□ -0.49
FN1-212ENST00000446046 TNPO3Q9Y5L0 923 aaKnown RBP11.98□□□□□ -0.49
FN1-212ENST00000446046 HIST1H2ABP04908 130 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 CCR3P51677 355 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 POLE2P56282 527 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 PGS1Q32NB8 556 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 FBXO38Q6PIJ6 1188 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 SMIM5Q71RC9 77 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 HIST3H2AQ7L7L0 130 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 LUZP2Q86TE4 346 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 UNC93AQ86WB7 457 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 HIST1H2ACQ93077 130 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 PNMA5Q96PV4 448 aa11.98□□□□□ -0.49
FN1-212ENST00000446046 FOXN3O00409 490 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 NPR3P17342 541 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 C11orf88Q6PI97 169 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 SLC30A10Q6XR72 485 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 IL22Q9GZX6 179 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PLAGL2Q9UPG8 496 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 SNX8Q9Y5X2 465 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PIK3CDO00329 1044 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 THRAP10827 490 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 AKAP5P24588 427 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 GPR15P49685 360 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 TRIM71Q2Q1W2 868 aaKnown RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 LRRC23Q53EV4 343 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 OTOP1Q7RTM1 612 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CBWD2Q8IUF1 395 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 EXO5Q9H790 373 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 GPAMQ9HCL2 828 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CATSPERZQ9NTU4 200 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 KLHL20Q9Y2M5 609 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CCNDBP1O95273 360 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 FTH1P02794 183 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 LGALS2P05162 132 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 RFX3P48380 749 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 FXR1P51114 621 aaKnown RBP eCLIP11.97□□□□□ -0.49
FN1-212ENST00000446046 LONRF1Q17RB8 773 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 DCLRE1AQ6PJP8 1040 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CATSPERGQ6ZRH7 1159 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 SLC47A2Q86VL8 602 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PEX5LQ8IYB4 626 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 ZNF513Q8N8E2 541 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 SERPINI2O75830 405 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 RFX5P48382 616 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 RARRES1P49788 294 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 GUCY1A3Q02108 690 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 GCNT1Q02742 428 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PPP1R15BQ5SWA1 713 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 SENP8Q96LD8 212 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CBWD1Q9BRT8 395 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 INTS13Q9NVM9 706 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 ZMYM5Q9UJ78 669 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 DUOX1Q9NRD9 1551 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 JCHAINP01591 159 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 GRIK3Q13003 919 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 SHROOM1Q2M3G4 852 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 TRAPPC5Q8IUR0 188 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CHAMP1Q96JM3 812 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PPP1R10Q96QC0 940 aaKnown RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 COMMD8Q9NX08 183 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 ACOT9Q9Y305 439 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 XRN1Q8IZH2 1706 aaKnown RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 A0A087X1B8 175 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.97□□□□□ -0.49
FN1-212ENST00000446046 SLC2A4P14672 509 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 INAVAQ3KP66 663 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 FBXL16Q8N461 479 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 SOHLH2Q9NX45 425 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 AVILO75366 819 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CD151P48509 253 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PCYT1AP49585 367 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 LRRC14Q15048 493 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 TOMM20Q15388 145 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 LGI2Q8N0V4 545 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 CPNE1Q99829 537 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 PCDH9Q9HC56 1237 aa11.97□□□□□ -0.49
FN1-212ENST00000446046 RNF103O00237 685 aa11.96□□□□□ -0.49
FN1-212ENST00000446046 NUP62P37198 522 aaPredicted RBP11.96□□□□□ -0.49
FN1-212ENST00000446046 MDH1P40925 334 aaKnown RBP11.96□□□□□ -0.49
FN1-212ENST00000446046 CCT8P50990 548 aa11.96□□□□□ -0.49
FN1-212ENST00000446046 MARSP56192 900 aaKnown RBP11.96□□□□□ -0.49
FN1-212ENST00000446046 PGLYRP2Q96PD5 576 aa11.96□□□□□ -0.49
FN1-212ENST00000446046 ESYT3A0FGR9 886 aa11.96□□□□□ -0.49
FN1-212ENST00000446046 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms