RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PDGFRAP16234 1089 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 GPD1P21695 349 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 CCR1P32246 355 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 CD70P32970 193 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 RDXP35241 583 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 GRIA2P42262 883 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 GRSF1Q12849 480 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 ANGPT1Q15389 498 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 C5orf22Q49AR2 442 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 MPPE1Q53F39 396 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM72AQ5TYM5 149 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 GRAMD4Q6IC98 578 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM72DQ6L9T8 149 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 MAMSTRQ6ZN01 415 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 CHSY1Q86X52 802 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM72BQ86X60 149 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 C1orf210Q8IVY1 113 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 DRC7Q8IY82 874 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 LGI2Q8N0V4 545 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 IL17RCQ8NAC3 791 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 RPLP0P6Q8NHW5 317 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 ZNF653Q96CK0 615 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 PHOX2BQ99453 314 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 SELENOOQ9BVL4 669 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 TKTL2Q9H0I9 626 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 CNOT8Q9UFF9 292 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 STAP1Q9ULZ2 295 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 BZW2Q9Y6E2 419 aaKnown RBP13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 DMDP11532 3685 aa13.3□□□□□ -0.28
PDLIM2-212ENST00000443561 AKR1B15C9JRZ8 316 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 H0Y858 1186 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SGK1O00141 431 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 CNTN5O94779 1100 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 PAPSS2O95340 614 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 CYP1A2P05177 515 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 ABCB4P21439 1286 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 MAGEA9P43362 315 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SLC11A2P49281 568 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 DGKGP49619 791 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 ZNF143P52747 638 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 GALCP54803 685 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 LMAN2Q12907 356 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 AUHQ13825 339 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 LRRC32Q14392 662 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 FUT11Q495W5 492 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 ALFQ53S48 1182 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 BRMS1LQ5PSV4 323 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 C10orf76Q5T2E6 689 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 MPP7Q5T2T1 576 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 CXorf57Q6NSI4 855 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 ALKBH5Q6P6C2 394 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 TMEM92Q6UXU6 159 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 STRADAQ7RTN6 431 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 ADIPOR2Q86V24 386 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 TMEM139Q8IV31 216 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SYNPOQ8N3V7 929 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SPEM1Q8N4L4 309 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 ATP6V0D2Q8N8Y2 350 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 DDI1Q8WTU0 396 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM172AQ8WUF8 416 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SORCS1Q8WY21 1168 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 TMA16Q96EY4 203 aaKnown RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SPTLC3Q9NUV7 552 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 SPATA6Q9NWH7 488 aaPredicted RBP13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 DEC1Q9P2X7 70 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 MYO15AQ9UKN7 3530 aa13.29□□□□□ -0.28
PDLIM2-212ENST00000443561 TNRC6BQ9UPQ9 1833 aaKnown RBP13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 IGLV3-10A0A075B6K4 115 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 APODP05090 189 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 SP9P0CG40 484 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 SDC4P31431 198 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 GBP1P32455 592 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 TIE1P35590 1138 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 NUMBP49757 651 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 NUBP1P53384 320 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 SEMA3BQ13214 749 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 ENPP2Q13822 863 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 SLC18A3Q16572 532 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 C2orf27AQ580R0 203 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 PYROXD2Q8N2H3 581 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 CCDC33Q8N5R6 958 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 ALLCQ8N6M5 410 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 HJURPQ8NCD3 748 aaPredicted RBP13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 ALG14Q96F25 216 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 MYO19Q96H55 970 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 BTBD6Q96KE9 485 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 WDCPQ9H6R7 721 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 ABCB8Q9NUT2 735 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 FAM86C1Q9NVL1 165 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 STIM2Q9P246 746 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 MYO1AQ9UBC5 1043 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 VANGL2Q9ULK5 521 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 STARD13Q9Y3M8 1113 aa13.28□□□□□ -0.28
PDLIM2-212ENST00000443561 USP34Q70CQ2 3546 aa13.27□□□□□ -0.28
PDLIM2-212ENST00000443561 DRGXA6NNA5 263 aa13.27□□□□□ -0.29
PDLIM2-212ENST00000443561 WASH3PC4AMC7 463 aa13.27□□□□□ -0.29
PDLIM2-212ENST00000443561 NCAM2O15394 837 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms