RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 CHRM1P11229 460 aaPredicted RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 EIF2DP41214 584 aaKnown RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 CLCN5P51795 746 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 AMPD2Q01433 879 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 AUHQ13825 339 aaKnown RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 CYP4V2Q6ZWL3 525 aaPredicted RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 CPNE8Q86YQ8 564 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 FNIP1Q8TF40 1166 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 CLDN23Q96B33 292 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 PEBP4Q96S96 227 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 PNKPQ96T60 521 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 EIF3CQ99613 913 aaKnown RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 BAG1Q99933 345 aaPredicted RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 OSBPL6Q9BZF3 934 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 LMAN1LQ9HAT1 526 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 OSGEPQ9NPF4 335 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 STIM2Q9P246 746 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 ANAPC7Q9UJX3 599 aa16.58■□□□□ 0.24
USP39-205ENST00000442708 MRPS17Q9Y2R5 130 aaKnown RBP16.58■□□□□ 0.24
USP39-205ENST00000442708 FAM72CH0Y354 149 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 K7EQS6 105 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 KAT7O95251 611 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 NDUFA10O95299 355 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 CYBBP04839 570 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 TCF4P15884 667 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 GRSF1Q12849 480 aaKnown RBP eCLIP16.57■□□□□ 0.24
USP39-205ENST00000442708 GAS6Q14393 721 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 FAM72AQ5TYM5 149 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 FAM72DQ6L9T8 149 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 SCYL2Q6P3W7 929 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 PKN3Q6P5Z2 889 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 C1orf228Q6PIY5 440 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 Q6ZS52 159 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 FAM72BQ86X60 149 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 PYROXD2Q8N2H3 581 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 HJURPQ8NCD3 748 aaPredicted RBP16.57■□□□□ 0.24
USP39-205ENST00000442708 CTNNBL1Q8WYA6 563 aaPredicted RBP16.57■□□□□ 0.24
USP39-205ENST00000442708 XPO6Q96QU8 1125 aaKnown RBP16.57■□□□□ 0.24
USP39-205ENST00000442708 HAPLN3Q96S86 360 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 NELL2Q99435 816 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 DDX50Q9BQ39 737 aaKnown RBP16.57■□□□□ 0.24
USP39-205ENST00000442708 ARHGEF4Q9NR80 690 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 CTTNBP2NLQ9P2B4 639 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 DEC1Q9P2X7 70 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 HCN2Q9UL51 889 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 VANGL2Q9ULK5 521 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 PCDHA13Q9Y5I0 950 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 EPN1Q9Y6I3 576 aaPredicted RBP16.57■□□□□ 0.24
USP39-205ENST00000442708 ZNF318Q5VUA4 2279 aa16.57■□□□□ 0.24
USP39-205ENST00000442708 A0A0A0MRY4 1105 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 RCCD1A6NED2 376 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 F5H5T6 163 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 LRCH4O75427 683 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 AVPR2P30518 371 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 CYLC1P35663 651 aaPredicted RBP16.56■□□□□ 0.24
USP39-205ENST00000442708 MAGEA1P43355 309 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 DGKGP49619 791 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 MRE11P49959 708 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 C5orf22Q49AR2 442 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 MPP7Q5T2T1 576 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 GRAMD4Q6IC98 578 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 ACRBPQ8NEB7 543 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 SLC35G2Q8TBE7 412 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 ZNF564Q8TBZ8 553 aaPredicted RBP16.56■□□□□ 0.24
USP39-205ENST00000442708 LMLNQ96KR4 655 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 C1orf74Q96LT6 269 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 IRX2Q9BZI1 471 aaPredicted RBP16.56■□□□□ 0.24
USP39-205ENST00000442708 TMEM51Q9NW97 253 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 PCSK1NQ9UHG2 260 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 INTUQ9ULD6 942 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 FZD10Q9ULW2 581 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 NEU3Q9UQ49 428 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 ARIH1Q9Y4X5 557 aaPredicted RBP16.56■□□□□ 0.24
USP39-205ENST00000442708 PAXBP1Q9Y5B6 917 aa16.56■□□□□ 0.24
USP39-205ENST00000442708 PRRT4C9JH25 899 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 CNTN5O94779 1100 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 DRD1P21728 446 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 MIPP30301 263 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 HLA-FP30511 346 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 GRIA2P42262 883 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
USP39-205ENST00000442708 SEC13P55735 322 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 GSDMDP57764 484 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 SCAPQ12770 1279 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 GEN1Q17RS7 908 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 ALFQ53S48 1182 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 FSCBQ5H9T9 825 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 C10orf76Q5T2E6 689 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 EMC10Q5UCC4 262 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 MANEALQ5VSG8 457 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 TMEM215Q68D42 235 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 SLFN11Q7Z7L1 901 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 NIPA2Q8N8Q9 360 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 TERB1Q8NA31 727 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 NTAN1Q96AB6 310 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 RPRD1AQ96P16 312 aaPredicted RBP16.55■□□□□ 0.24
USP39-205ENST00000442708 OSBPL2Q9H1P3 480 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 GPATCH2LQ9NWQ4 482 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 C2orf42Q9NWW7 574 aa16.55■□□□□ 0.24
USP39-205ENST00000442708 UVRAGQ9P2Y5 699 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms