RNA–Protein interactions for RNA: ENST00000442447.5

RBM39-215, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-215ENST00000442447 RNF34Q969K3 372 aa16.78■□□□□ 0.28
RBM39-215ENST00000442447 SPAG5Q96R06 1193 aa16.78■□□□□ 0.28
RBM39-215ENST00000442447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■■□□ 18.8
RBM39-215ENST00000442447 NOCTQ9UK39 431 aaKnown RBP16.78■□□□□ 0.28
RBM39-215ENST00000442447 CDV3Q9UKY7 258 aaKnown RBP16.78■□□□□ 0.28
RBM39-215ENST00000442447 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 BCLAF3A2AJT9 711 aaKnown RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 LRRC10BA6NIK2 292 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 SYNCRIPO60506 623 aaKnown RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 ZNF806P0C7X5 589 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 TACR2P21452 398 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 CCR1P32246 355 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 GABRB2P47870 512 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 DHPSP49366 369 aaPredicted RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 RNASE9P60153 205 aaKnown RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 NOMO3P69849 1222 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 NME3Q13232 169 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 E2F5Q15329 346 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 FNDC3BQ53EP0 1204 aaKnown RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 C2CD6Q53TS8 623 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 PLA2G2CQ5R387 149 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 KIAA1324Q6UXG2 1013 aaKnown RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 SERPINA13PQ6UXR4 307 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 LPCAT2Q7L5N7 544 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 KIAA0907Q7Z7F0 614 aaPredicted RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 XYLT1Q86Y38 959 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 DHX40Q8IX18 779 aaKnown RBP16.77■□□□□ 0.28
RBM39-215ENST00000442447 TMEFF1Q8IYR6 380 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 NEK11Q8NG66 645 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 CPA5Q8WXQ8 436 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 C18orf8Q96DM3 657 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 MRGPRX1Q96LB2 322 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 DLL3Q9NYJ7 618 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 SLC12A6Q9UHW9 1150 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 CYP8B1Q9UNU6 501 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 DAAM1Q9Y4D1 1078 aa16.77■□□□□ 0.28
RBM39-215ENST00000442447 ABCA7Q8IZY2 2146 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 RALGAPA1Q6GYQ0 2036 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.76■□□□□ 0.27
RBM39-215ENST00000442447 KCNU1A8MYU2 1149 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 M0QYT0 321 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 GDF9O60383 454 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 SLC2A3P11169 496 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 HLA-EP13747 358 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 ABCB4P21439 1286 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 NOS2P35228 1153 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 STAT1P42224 750 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 MATKP42679 507 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 CDR2Q01850 454 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 LMAN2Q12907 356 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 CDH18Q13634 790 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 PUM1Q14671 1186 aaKnown RBP eCLIP16.76■□□□□ 0.27
RBM39-215ENST00000442447 AASDHQ4L235 1098 aaPredicted RBP16.76■□□□□ 0.27
RBM39-215ENST00000442447 FAM102AQ5T9C2 384 aaPredicted RBP16.76■□□□□ 0.27
RBM39-215ENST00000442447 OTUD1Q5VV17 481 aaPredicted RBP16.76■□□□□ 0.27
RBM39-215ENST00000442447 MBLAC2Q68D91 279 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 ARMCX6Q7L4S7 300 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 CYP2U1Q7Z449 544 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 ZNF677Q86XU0 584 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 ZNF557Q8N988 423 aaPredicted RBP16.76■□□□□ 0.27
RBM39-215ENST00000442447 C12orf50Q8NA57 414 aaPredicted RBP16.76■□□□□ 0.27
RBM39-215ENST00000442447 MSANTD4Q8NCY6 345 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 FIBINQ8TAL6 211 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 LMLNQ96KR4 655 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 ERGIC2Q96RQ1 377 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 CD93Q9NPY3 652 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 VPS45Q9NRW7 570 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.76■□□□□ 0.27
RBM39-215ENST00000442447 CEP250Q9BV73 2442 aa16.76■□□□□ 0.27
RBM39-215ENST00000442447 THADAQ6YHU6 1953 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 IGHV1OR15-9A0A0B4J2B8 117 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 F5H5T6 163 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 GOLGA8SH3BPF8 625 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 FOXD2O60548 495 aaPredicted RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 ZNF217O75362 1048 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 LUC7L3O95232 432 aaKnown RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 CAVIN2O95810 425 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 EPHX1P07099 455 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 CHRNB2P17787 502 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 POLR2EP19388 210 aaKnown RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 TFE3P19532 575 aaPredicted RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 FMO1Q01740 532 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 RPL6Q02878 288 aaKnown RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 PTPRNQ16849 979 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 FSCBQ5H9T9 825 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 TCEAL6Q6IPX3 200 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 MMS22LQ6ZRQ5 1243 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 CIR1Q86X95 450 aaPredicted RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 CCDC117Q8IWD4 279 aaPredicted RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 DEFB119Q8N690 84 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 ZNF366Q8N895 744 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 TCEAL3Q969E4 200 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 NPY6RQ99463 290 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 PRMT1Q99873 361 aaKnown RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 ADAM33Q9BZ11 813 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 MKRN2Q9H000 416 aaKnown RBP16.75■□□□□ 0.27
RBM39-215ENST00000442447 PRDM16Q9HAZ2 1276 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 PLA2G4CQ9UP65 541 aa16.75■□□□□ 0.27
RBM39-215ENST00000442447 PLXND1Q9Y4D7 1925 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms