RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 ANKRD20A2Q5SQ80 823 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ANKRD20A1Q5TYW2 823 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 EMC10Q5UCC4 262 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ANKRD20A3Q5VUR7 823 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PID1Q7Z2X4 250 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ITIH5Q86UX2 942 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PYROXD2Q8N2H3 581 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SCAMP5Q8TAC9 235 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 DYDC1Q8WWB3 177 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 TLCD1Q96CP7 247 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PAWRQ96IZ0 340 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 OLFM3Q96PB7 478 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 UBE2OQ9C0C9 1292 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 ADAM7Q9H2U9 754 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PRDM12Q9H4Q4 367 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 RETREG1Q9H6L5 497 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 IL37Q9NZH6 218 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 MARCH2Q9P0N8 246 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 LGALS13Q9UHV8 139 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ACTL7BQ9Y614 415 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 CDY1Q9Y6F8 540 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SLC12A8A0AV02 714 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ZBBXA8MT70 800 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 NT5C1B-RDH14C9J2C7 533 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 E7ESA3 106 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 F8W810 466 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 GOLGA8MH3BSY2 632 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PAGE1O75459 146 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 MOCS2O96007 188 aaPredicted RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 IGLV3-25P01717 112 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 APRTP07741 180 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 GALNT2Q10471 571 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 EFEMP1Q12805 493 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SEMA3BQ13214 749 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SEMA5AQ13591 1074 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 RASA2Q15283 850 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SLC8B1Q6J4K2 584 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SCD5Q86SK9 330 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PRUNE1Q86TP1 453 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 TDRPQ86YL5 185 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SLC39A11Q8N1S5 342 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 BBS5Q8N3I7 341 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 TAB3Q8N5C8 712 aaPredicted RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 SH2D3CQ8N5H7 860 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 GLIS1Q8NBF1 620 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 CCDC110Q8TBZ0 833 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 CDKL2Q92772 493 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 TOP1MTQ969P6 601 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 HDAC11Q96DB2 347 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 BTN2A3PQ96KV6 586 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ZBED2Q9BTP6 218 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ETNK1Q9HBU6 452 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 IGSF9Q9P2J2 1179 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PSMC3IPQ9P2W1 217 aaPredicted RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 RSPH14Q9UHP6 348 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 IQANK1A0A1B0GTG1 560 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ARHGAP42A6NI28 874 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 LRIG2O94898 1065 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 HSPA8P11142 646 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 RHOQP17081 205 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 KRT15P19012 456 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 OR1D2P34982 312 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 MDH1P40925 334 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 SLCO1A2P46721 670 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SLC11A2P49281 568 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ATP1A2P50993 1020 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 RABGGTBP53611 331 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 EPHB3P54753 998 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 RING1Q06587 406 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 PPIDQ08752 370 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 TAF10Q12962 218 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 AUHQ13825 339 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 RTP2Q5QGT7 225 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS50-205ENST00000441602 BHLHA9Q7RTU4 235 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 FIBCD1Q8N539 461 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ZNF276Q8N554 614 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 COLGALT1Q8NBJ5 622 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 FBXO36Q8NEA4 188 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ARHGEF2Q92974 986 aaKnown RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 C1orf74Q96LT6 269 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 ZNF512Q96ME7 567 aaPredicted RBP6.2□□□□□ -1.42
VPS50-205ENST00000441602 TTLL2Q9BWV7 592 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 C10orf88Q9H8K7 445 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 IL23AQ9NPF7 189 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 TMEM30AQ9NV96 361 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 BFARQ9NZS9 450 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 SAMD15Q9P1V8 674 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 TSC2P49815 1807 aa6.2□□□□□ -1.42
VPS50-205ENST00000441602 FAM92AA1XBS5 289 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 POC1B-GALNT4F8VUJ3 575 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 PRRG1O14668 218 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TRDMT1O14717 391 aaKnown RBP6.19□□□□□ -1.42
VPS50-205ENST00000441602 ANXA9O76027 345 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 SHBGP04278 402 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 INHBAP08476 426 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 MMP13P45452 471 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 TUBP50607 506 aa6.19□□□□□ -1.42
VPS50-205ENST00000441602 GYS2P54840 703 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms