RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 FNDC8Q8TC99 324 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 RTKNQ9BST9 563 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 ACSS2Q9NR19 701 aa20.83■□□□□ 0.93
SHOX2-203ENST00000441443 RSL24D1Q9UHA3 163 aaKnown RBP20.83■□□□□ 0.93
SHOX2-203ENST00000441443 FAM189A1O60320 539 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 METTL18O95568 372 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 HMGCRP04035 888 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 RALBP11234 206 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 CDH5P33151 784 aaPredicted RBP20.83■□□□□ 0.92
SHOX2-203ENST00000441443 RAP1GAPP47736 663 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF534Q76KX8 674 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 XYLT1Q86Y38 959 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 OR52B2Q96RD2 323 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 CCT7Q99832 543 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 SUDS3Q9H7L9 328 aaPredicted RBP20.83■□□□□ 0.92
SHOX2-203ENST00000441443 CYP26B1Q9NR63 512 aa20.83■□□□□ 0.92
SHOX2-203ENST00000441443 FUT4P22083 530 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 ACAT1P24752 427 aaKnown RBP20.82■□□□□ 0.92
SHOX2-203ENST00000441443 SLC10A2Q12908 348 aaPredicted RBP20.82■□□□□ 0.92
SHOX2-203ENST00000441443 C15orf59Q2T9L4 293 aaPredicted RBP20.82■□□□□ 0.92
SHOX2-203ENST00000441443 DCAF15Q66K64 600 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 ZBTB33Q86T24 672 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 SNX32Q86XE0 403 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 TICAM1Q8IUC6 712 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 TNS4Q8IZW8 715 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 PLD5Q8N7P1 536 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 ADAM32Q8TC27 787 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 ATP6V0A1Q93050 837 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 MOCOSQ96EN8 888 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 NXF1Q9UBU9 619 aaKnown RBP20.82■□□□□ 0.92
SHOX2-203ENST00000441443 PCDHGC3Q9UN70 934 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 SH3GLB1Q9Y371 365 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 STYXL1Q9Y6J8 313 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 GLRA3O75311 464 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 PRKCGP05129 697 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 THRAP10827 490 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 MYL4P12829 197 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 TCN1P20061 433 aaPredicted RBP20.82■□□□□ 0.92
SHOX2-203ENST00000441443 ACTR2P61160 394 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 CNTN2Q02246 1040 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 KBTBD7Q8WVZ9 684 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 NIF3L1Q9GZT8 377 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 PSAT1Q9Y617 370 aa20.82■□□□□ 0.92
SHOX2-203ENST00000441443 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
SHOX2-203ENST00000441443 STX16-NPEPL1H3BU86 382 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 VARSP26640 1264 aaKnown RBP20.81■□□□□ 0.92
SHOX2-203ENST00000441443 FSCBQ5H9T9 825 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 TSPAN14Q8NG11 270 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 FNIP1Q8TF40 1166 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 XPNPEP3Q9NQH7 507 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 NR2E3Q9Y5X4 410 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 NEMP1O14524 444 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 ATG7O95352 703 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 AMHP03971 560 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF280AP59817 542 aaPredicted RBP20.81■□□□□ 0.92
SHOX2-203ENST00000441443 YWHAEP62258 255 aaKnown RBP20.81■□□□□ 0.92
SHOX2-203ENST00000441443 DSELQ8IZU8 1212 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 ZBTB8BQ8NAP8 495 aaPredicted RBP20.81■□□□□ 0.92
SHOX2-203ENST00000441443 ADCY4Q8NFM4 1077 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 ATP2A3Q93084 1043 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 MAML3Q96JK9 1138 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 THEGQ9P2T0 379 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 COPG2Q9UBF2 871 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF214Q9UL59 606 aaPredicted RBP20.81■□□□□ 0.92
SHOX2-203ENST00000441443 PCDHA11Q9Y5I1 949 aa20.81■□□□□ 0.92
SHOX2-203ENST00000441443 WDR27A2RRH5 827 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 GRAP2O75791 330 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 TCF7P36402 384 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 C1QTNF12Q5T7M4 302 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 BORAQ6PGQ7 559 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 TIFABQ6ZNK6 161 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 LPCAT2Q7L5N7 544 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 DEPTORQ8TB45 409 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 RNF157Q96PX1 679 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 FRMD8Q9BZ67 464 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 WDR55Q9H6Y2 383 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 GGA3Q9NZ52 723 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 PSAPP07602 524 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 F7P08709 466 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 ENO3P13929 434 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 KCNA2P16389 499 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 BCAR1P56945 870 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 PPP2R5DQ14738 602 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 SCYL2Q6P3W7 929 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 RNF168Q8IYW5 571 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 FAM156AQ8NDB6 213 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 NLRP7Q8WX94 980 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 PSMC3P17980 439 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 PTPN1P18031 435 aaKnown RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 GRK2P25098 689 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 EPHA3P29320 983 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 ENTPD1P49961 510 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 TGFB2P61812 414 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 TFDP2Q14188 446 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 FAM102AQ5T9C2 384 aaPredicted RBP20.8■□□□□ 0.92
SHOX2-203ENST00000441443 POTEHQ6S545 545 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 DPH6Q7L8W6 267 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 TMEM130Q8N3G9 435 aa20.8■□□□□ 0.92
SHOX2-203ENST00000441443 ZNF668Q96K58 619 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms