RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PRSS55Q6UWB4 352 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PDZD4Q76G19 769 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 LPCAT2Q7L5N7 544 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SYT13Q7L8C5 426 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 HDXQ7Z353 690 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 RHPN2Q8IUC4 686 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 MINDY1Q8N5J2 469 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 LEMD2Q8NC56 503 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 ZSWIM2Q8NEG5 633 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 RIN3Q8TB24 985 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 DEPTORQ8TB45 409 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PSPC1Q8WXF1 523 aaKnown RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 NXPE2Q96DL1 559 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 EEF2KMTQ96G04 330 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PLPPR2Q96GM1 343 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 B3GALT6Q96L58 329 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 GAD1Q99259 594 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CLSTN3Q9BQT9 956 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CBWD1Q9BRT8 395 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 TTPALQ9BTX7 342 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SRRTQ9BXP5 876 aaKnown RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 GTPBP4Q9BZE4 634 aaKnown RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 GPR62Q9BZJ7 368 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 WNT10AQ9GZT5 417 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 HAPLN2Q9GZV7 340 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 NAT10Q9H0A0 1025 aaKnown RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 CCDC113Q9H0I3 377 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 MINDY3Q9H8M7 445 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 C17orf75Q9HAS0 396 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 SP110Q9HB58 689 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 KMT5AQ9NQR1 393 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 AGPAT3Q9NRZ7 376 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 DMAC2Q9NW81 257 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 MBD1Q9UIS9 605 aaPredicted RBP5.11□□□□□ -1.59
PTPN4-206ENST00000441089 TBX20Q9UMR3 447 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 PAXBP1Q9Y5B6 917 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 UBE4BO95155 1302 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 OTOGQ6ZRI0 2925 aa5.11□□□□□ -1.59
PTPN4-206ENST00000441089 A0A087WZ62 844 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 BICDL2A1A5D9 508 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 KCNJ18B7U540 433 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 GOLGA6L19H0YKK7 550 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 PDXKO00764 312 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ABLIM1O14639 778 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 B4GALT5O43286 388 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 SH3BP5O60239 455 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 TADA2AO75478 443 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 CSDE1O75534 798 aaKnown RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 PIGRP01833 764 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 NR3C1P04150 777 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 SRGAP2CP0DJJ0 459 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ITGA4P13612 1032 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 BMP7P18075 431 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 DRD1P21728 446 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 CASP4P49662 377 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 DNM2P50570 870 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF75DP51815 510 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 PTENP60484 403 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 FANCCQ00597 558 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 NFKB2Q00653 900 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 FKBP3Q00688 224 aaKnown RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 MBTD1Q05BQ5 628 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 LRRC63Q05C16 580 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ELAVL2Q12926 359 aaKnown RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 STIM1Q13586 685 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ALCAMQ13740 583 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 KCNJ12Q14500 433 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 KRT31Q15323 416 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 TRIP11Q15643 1979 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 NFIL3Q16649 462 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 EDRF1Q3B7T1 1238 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ITPRIPL2Q3MIP1 535 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 PREPLQ4J6C6 727 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 TMEM196Q5HYL7 178 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 WIPI1Q5MNZ9 446 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 RTP2Q5QGT7 225 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 IQCEQ6IPM2 695 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 C22orf34Q6ZV56 151 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 PHLPP2Q6ZVD8 1323 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 CATSPER4Q7RTX7 472 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 SLCO6A1Q86UG4 719 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ZNF410Q86VK4 478 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 NAXDQ8IW45 347 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ELMOD1Q8N336 334 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 CSGALNACT2Q8N6G5 542 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 RNF149Q8NC42 400 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 TSTD1Q8NFU3 115 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 CCDC26Q8TAB7 109 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ABHD4Q8TB40 342 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 PLEKHO2Q8TD55 490 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 TCP11Q8WWU5 503 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 HVCN1Q96D96 273 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 MED8Q96G25 268 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 ZBTB45Q96K62 511 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 IFT74Q96LB3 600 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 CNOT6LQ96LI5 555 aaKnown RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 NLRP4Q96MN2 994 aa5.1□□□□□ -1.59
PTPN4-206ENST00000441089 NAP1L5Q96NT1 182 aaPredicted RBP5.1□□□□□ -1.59
PTPN4-206ENST00000441089 KCNC2Q96PR1 638 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms