RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 IGLV3-27P01718 113 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 PBX2P40425 430 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 HCAR3P49019 387 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 IRAK1P51617 712 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 HECTD3Q5T447 861 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 RHBDF2Q6PJF5 856 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 MRPL43Q8N983 215 aaKnown RBP19.68■□□□□ 0.74
SNX17-203ENST00000440760 KREMEN2Q8NCW0 462 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.68■□□□□ 0.74
SNX17-203ENST00000440760 EMILIN2Q9BXX0 1053 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 CERS4Q9HA82 394 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 DNMT3LQ9UJW3 386 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 ANAPC5Q9UJX4 755 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 VANGL2Q9ULK5 521 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 YBX2Q9Y2T7 364 aaKnown RBP19.68■□□□□ 0.74
SNX17-203ENST00000440760 RWDD3Q9Y3V2 267 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 IRAK3Q9Y616 596 aa19.68■□□□□ 0.74
SNX17-203ENST00000440760 ATG2AQ2TAZ0 1938 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 BCLAF3A2AJT9 711 aaKnown RBP19.67■□□□□ 0.74
SNX17-203ENST00000440760 GLUD1P00367 558 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 ITIH2P19823 946 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 ATP5C1P36542 298 aaKnown RBP19.67■□□□□ 0.74
SNX17-203ENST00000440760 DHX9Q08211 1270 aaKnown RBP19.67■□□□□ 0.74
SNX17-203ENST00000440760 MS4A13Q5J8X5 152 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 UBAP2Q5T6F2 1119 aaKnown RBP19.67■□□□□ 0.74
SNX17-203ENST00000440760 SNX30Q5VWJ9 437 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 CCDC25Q86WR0 208 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 CCHCR1Q8TD31 782 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 DEPDC1BQ8WUY9 529 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 TBC1D31Q96DN5 1066 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 CELF6Q96J87 481 aaKnown RBP19.67■□□□□ 0.74
SNX17-203ENST00000440760 MPP6Q9NZW5 540 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 ATP8A1Q9Y2Q0 1164 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 MTCL1Q9Y4B5 1905 aaKnown RBP19.67■□□□□ 0.74
SNX17-203ENST00000440760 DOCK4Q8N1I0 1966 aa19.67■□□□□ 0.74
SNX17-203ENST00000440760 C5orf67F2Z3F1 127 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 NRG2O14511 850 aaPredicted RBP19.66■□□□□ 0.74
SNX17-203ENST00000440760 LRG1P02750 347 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 SLC2A3P11169 496 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 HSPA9P38646 679 aaKnown RBP19.66■□□□□ 0.74
SNX17-203ENST00000440760 RAP1GAP2Q684P5 730 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 HIBCHQ6NVY1 386 aaPredicted RBP19.66■□□□□ 0.74
SNX17-203ENST00000440760 HS6ST3Q8IZP7 471 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 SLC22A17Q8WUG5 538 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 PRDM12Q9H4Q4 367 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 IL21Q9HBE4 155 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 TRPC7Q9HCX4 862 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 NDFIP2Q9NV92 336 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 MTRF1LQ9UGC7 380 aaKnown RBP19.66■□□□□ 0.74
SNX17-203ENST00000440760 DENND4CQ5VZ89 1909 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 TUBP50607 506 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 FAM193AP78312 1265 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 AP1B1Q10567 949 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 XRCC4Q13426 336 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 UAP1Q16222 522 aaPredicted RBP19.66■□□□□ 0.74
SNX17-203ENST00000440760 SYCP2LQ5T4T6 812 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 ATP6V0D2Q8N8Y2 350 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 CCNYQ8ND76 341 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 CCDC110Q8TBZ0 833 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 TFB1MQ8WVM0 346 aaKnown RBP19.66■□□□□ 0.74
SNX17-203ENST00000440760 CEP41Q9BYV8 373 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 ZMYND15Q9H091 742 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 RNF38Q9H0F5 515 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 MAFFQ9ULX9 164 aa19.66■□□□□ 0.74
SNX17-203ENST00000440760 GOLGA6L7A0A1B0GV03 622 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 CCL16O15467 120 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 ATP8B1O43520 1251 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 OAS1P00973 400 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 IRF1P10914 325 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 HOXC13P31276 330 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 STIP1P31948 543 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 CLCN4P51793 760 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 ZNF135P52742 658 aaPredicted RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 MLLT6P55198 1093 aaPredicted RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 CYP4F8P98187 520 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 GAD2Q05329 585 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 RNASEH2BQ5TBB1 312 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 FAXCQ5TGI0 409 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 ANKRD22Q5VYY1 191 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 HEATR6Q6AI08 1181 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 NADSYN1Q6IA69 706 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 ITIH5Q86UX2 942 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 MREGQ8N565 214 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 RTP4Q96DX8 246 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 MYEOVQ96EZ4 313 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 BTN2A3PQ96KV6 586 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 SLC22A12Q96S37 553 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 CDK5RAP1Q96SZ6 601 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 TXLNGYQ9BZA5 131 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 PRDM16Q9HAZ2 1276 aa19.65■□□□□ 0.74
SNX17-203ENST00000440760 TPX2Q9ULW0 747 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 NYNRINQ9P2P1 1898 aaKnown RBP19.65■□□□□ 0.74
SNX17-203ENST00000440760 CFAP69A5D8W1 941 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 F5H423 210 aaPredicted RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 F11P03951 625 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 HSD17B3P37058 310 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 BASP1P80723 227 aaKnown RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 RING1Q06587 406 aa19.64■□□□□ 0.74
SNX17-203ENST00000440760 AUHQ13825 339 aaKnown RBP19.64■□□□□ 0.74
SNX17-203ENST00000440760 PRKD1Q15139 912 aaPredicted RBP19.64■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms