RNA–Protein interactions for RNA: ENST00000439706.5

SLC38A1-202, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-202ENST00000439706 CERKQ8TCT0 537 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 AGAP2Q99490 1192 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 EBNA1BP2Q99848 306 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SLC4A5Q9BY07 1137 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 ARHGAP28Q9P2N2 729 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 CROCCQ5TZA2 2017 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 ARHGAP10A1A4S6 786 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SPDYE2BA6NHP3 402 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 KCNK1O00180 336 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 KLF11O14901 512 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 B4GALT5O43286 388 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SERPINE1P05121 402 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SPDYE6P0CI01 402 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 HNRNPDQ14103 355 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 NOMO1Q15155 1222 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SPDYE2Q495Y8 402 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 TMEM259Q4ZIN3 620 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 MTX3Q5HYI7 312 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 KCNT2Q6UVM3 1135 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 RPS27LQ71UM5 84 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 KBTBD6Q86V97 674 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 NAT16Q8N8M0 369 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 DNAAF3Q8N9W5 541 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 PCDH19Q8TAB3 1148 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 TRAPPC12Q8WVT3 735 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 NLRP7Q8WX94 980 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 NRDE2Q9H7Z3 1164 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 PFDN4Q9NQP4 134 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 TMPRSS4Q9NRS4 437 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 ASNSD1Q9NWL6 643 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 RRN3Q9NYV6 651 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 ARHGEF37A1IGU5 675 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 FAM149AA5PLN7 773 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 C9JVG2 144 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 JUNP05412 331 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 MMP10P09238 476 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 CXCL8P10145 99 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 HSD17B4P51659 736 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 TFDP2Q14188 446 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 STRIP1Q5VSL9 837 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 IL23RQ5VWK5 629 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 PYROXD2Q8N2H3 581 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF786Q8N393 782 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 PNPLA1Q8N8W4 532 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 GIPC3Q8TF64 312 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 LRTOMTQ8WZ04 291 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 RNF157Q96PX1 679 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SORT1Q99523 831 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SENP6Q9GZR1 1112 aaPredicted RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 SUDS3Q9H7L9 328 aaPredicted RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 GMPR2Q9P2T1 348 aaKnown RBP12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 PSMD13Q9UNM6 376 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 V9GYQ6 96 aa12.74□□□□□ -0.37
SLC38A1-202ENST00000439706 COL24A1Q17RW2 1714 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 SAC3D1A6NKF1 404 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 ITGB3P05106 788 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 NAGLUP54802 743 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 SNRPFP62306 86 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 XKR5Q6UX68 686 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 BNC2Q6ZN30 1099 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 FAM160B2Q86V87 743 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 KYQ8NBH2 561 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 NTPCRQ9BSD7 190 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 COQ10BQ9H8M1 238 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 AURKCQ9UQB9 309 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 ADAMTSL1Q8N6G6 1762 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 PHGDHO43175 533 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 PAPSS1O43252 624 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 MICAL2O94851 1124 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 PIK3R1P27986 724 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 SFNP31947 248 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 TGFB2P61812 414 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 CEACAM7Q14002 265 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 LPIN1Q14693 890 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 ANO4Q32M45 955 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF667Q5HYK9 610 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 HEATR6Q6AI08 1181 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 TRNP1Q6NT89 227 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 FASTKD5Q7L8L6 764 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 NDRG1Q92597 394 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 SIGLEC10Q96LC7 697 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 SLC39A3Q9BRY0 314 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 NOL11Q9H8H0 719 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 EPS15L1Q9UBC2 864 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 COPG2Q9UBF2 871 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNF180Q9UJW8 692 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 PPME1Q9Y570 386 aa12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-202ENST00000439706 TK2O00142 265 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 RGL2O15211 777 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 CHADO15335 359 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 STRNO43815 780 aa12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 RNASEH2AO75792 299 aaKnown RBP12.72□□□□□ -0.37
SLC38A1-202ENST00000439706 HOXA10P31260 410 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms