RNA–Protein interactions for RNA: ENST00000439603.5

LONRF3-204, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best)

Gene LONRF3, Length 1,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-204ENST00000439603 AGO1Q9UL18 857 aaKnown RBP24.07■■□□□ 1.44
LONRF3-204ENST00000439603 REV3LO60673 3130 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 GOLGA6L10A0A0M3HER8 536 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 LEFTY2O00292 366 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 APOL1O14791 398 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 GREM1O60565 184 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 EPHB2P29323 1055 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 LTBRP36941 435 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 PRDM16Q9HAZ2 1276 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 RBM12Q9NTZ6 932 aaKnown RBP24.06■■□□□ 1.44
LONRF3-204ENST00000439603 TDP1Q9NUW8 608 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 CFAP97Q9P2B7 532 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 LSM7Q9UK45 103 aaKnown RBP24.06■■□□□ 1.44
LONRF3-204ENST00000439603 VANGL2Q9ULK5 521 aa24.06■■□□□ 1.44
LONRF3-204ENST00000439603 GOLGA6L7A0A1B0GV03 622 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 C2orf54Q08AI8 447 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 ARTNQ5T4W7 220 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 LRRC31Q6UY01 552 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 DDX42Q86XP3 938 aaKnown RBP eCLIP24.05■■□□□ 1.44
LONRF3-204ENST00000439603 ZNF683Q8IZ20 524 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 PRELID2Q8N945 189 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 USP13Q92995 863 aaPredicted RBP24.05■■□□□ 1.44
LONRF3-204ENST00000439603 TBC1D31Q96DN5 1066 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 CCL26Q9Y258 94 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 SH3BP1Q9Y3L3 701 aa24.05■■□□□ 1.44
LONRF3-204ENST00000439603 LATS1O95835 1130 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 ZFXP17010 805 aaPredicted RBP24.04■■□□□ 1.44
LONRF3-204ENST00000439603 ERCC2P18074 760 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 TACR2P21452 398 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 FAM133BQ5BKY9 247 aaKnown RBP24.04■■□□□ 1.44
LONRF3-204ENST00000439603 RWDD4Q6NW29 188 aaKnown RBP24.04■■□□□ 1.44
LONRF3-204ENST00000439603 HTR3DQ70Z44 454 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 CHSY1Q86X52 802 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 ARID3BQ8IVW6 561 aaPredicted RBP24.04■■□□□ 1.44
LONRF3-204ENST00000439603 PLD5Q8N7P1 536 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 LRRN4CLQ8ND94 238 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 TTC16Q8NEE8 873 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 STOML2Q9UJZ1 356 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 NEU3Q9UQ49 428 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 CCDC188H7C350 402 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 HOXC13P31276 330 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 ADGRF1Q5T601 910 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 GPR153Q6NV75 609 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 FBXL22Q6P050 247 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 Q6ZNB5 142 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 NPAS3Q8IXF0 933 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 SH3RF2Q8TEC5 729 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 FGF13Q92913 245 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 MSLNLQ96KJ4 702 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 ETNK2Q9NVF9 386 aa24.04■■□□□ 1.44
LONRF3-204ENST00000439603 R3HDM2Q9Y2K5 976 aaKnown RBP24.04■■□□□ 1.44
LONRF3-204ENST00000439603 APOC4-APOC2K7ER74 178 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 APOC2P02655 101 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 TGM2P21980 687 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 SLC6A4P31645 630 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 NCBP2-AS2Q69YL0 99 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 GET4Q7L5D6 327 aaPredicted RBP24.03■■□□□ 1.44
LONRF3-204ENST00000439603 TTC13Q8NBP0 860 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 ZSCAN18Q8TBC5 510 aaPredicted RBP24.03■■□□□ 1.44
LONRF3-204ENST00000439603 HAUS1Q96CS2 278 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 SAE1Q9UBE0 346 aaPredicted RBP24.03■■□□□ 1.44
LONRF3-204ENST00000439603 PPARGC1AQ9UBK2 798 aaKnown RBP24.03■■□□□ 1.44
LONRF3-204ENST00000439603 ZNF510Q9Y2H8 683 aa24.03■■□□□ 1.44
LONRF3-204ENST00000439603 IGLV3-10A0A075B6K4 115 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 F5H5T6 163 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 DCLK1O15075 740 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 PRAMEF12O95522 483 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 WEE1P30291 646 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 CYP1B1Q16678 543 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 C1orf54Q8WWF1 131 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 RIPOR3Q96MK2 946 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 DDX50Q9BQ39 737 aaKnown RBP24.02■■□□□ 1.44
LONRF3-204ENST00000439603 CATSPERBQ9H7T0 1116 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 HOMER3Q9NSC5 361 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 SCAMP3O14828 347 aaKnown RBP24.02■■□□□ 1.44
LONRF3-204ENST00000439603 FGF10O15520 208 aaPredicted RBP24.02■■□□□ 1.44
LONRF3-204ENST00000439603 C1orf228Q6PIY5 440 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 Q7L0L9 218 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 LGI2Q8N0V4 545 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 P3H4Q92791 437 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 IGSF8Q969P0 613 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 MAGOHBQ96A72 148 aaKnown RBP24.02■■□□□ 1.44
LONRF3-204ENST00000439603 RPRD1AQ96P16 312 aaPredicted RBP24.02■■□□□ 1.44
LONRF3-204ENST00000439603 GDE1Q9NZC3 331 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 MFHAS1Q9Y4C4 1052 aa24.02■■□□□ 1.44
LONRF3-204ENST00000439603 E2F8A0AVK6 867 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 DRGXA6NNA5 263 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 PHF2O75151 1096 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 PECAM1P16284 738 aaPredicted RBP24.01■■□□□ 1.43
LONRF3-204ENST00000439603 OTUD4Q01804 1114 aaKnown RBP24.01■■□□□ 1.43
LONRF3-204ENST00000439603 CCNG2Q16589 344 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 RFWD3Q6PCD5 774 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 TMCO3Q6UWJ1 677 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 NPNTQ6UXI9 565 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 C12orf50Q8NA57 414 aaPredicted RBP24.01■■□□□ 1.43
LONRF3-204ENST00000439603 ACTL9Q8TC94 416 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 MYLIPQ8WY64 445 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 ATG4AQ8WYN0 398 aa24.01■■□□□ 1.43
LONRF3-204ENST00000439603 CDX2Q99626 313 aaPredicted RBP24.01■■□□□ 1.43
LONRF3-204ENST00000439603 FAM118BQ9BPY3 351 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms