RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ZACNQ401N2 412 aa8.81□□□□□ -1
HPS4-206ENST00000439453 XKR9Q5GH70 373 aa8.81□□□□□ -1
HPS4-206ENST00000439453 SYCP2LQ5T4T6 812 aa8.81□□□□□ -1
HPS4-206ENST00000439453 TDRD10Q5VZ19 366 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 ZNF554Q86TJ5 538 aa8.81□□□□□ -1
HPS4-206ENST00000439453 KBTBD6Q86V97 674 aa8.81□□□□□ -1
HPS4-206ENST00000439453 WDR75Q8IWA0 830 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 DEFB107AQ8IZN7 70 aa8.81□□□□□ -1
HPS4-206ENST00000439453 CEP70Q8NHQ1 597 aa8.81□□□□□ -1
HPS4-206ENST00000439453 NLRP4Q96MN2 994 aa8.81□□□□□ -1
HPS4-206ENST00000439453 SHCBP1LQ9BZQ2 653 aa8.81□□□□□ -1
HPS4-206ENST00000439453 APOBEC3GQ9HC16 384 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 PCDHGB4Q9UN71 923 aa8.81□□□□□ -1
HPS4-206ENST00000439453 APOBEC2Q9Y235 224 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 PCDHGB5Q9Y5G0 923 aa8.81□□□□□ -1
HPS4-206ENST00000439453 AVILO75366 819 aa8.81□□□□□ -1
HPS4-206ENST00000439453 F2P00734 622 aa8.81□□□□□ -1
HPS4-206ENST00000439453 TNNI1P19237 187 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ITGB8P26012 769 aa8.81□□□□□ -1
HPS4-206ENST00000439453 L1CAMP32004 1257 aa8.81□□□□□ -1
HPS4-206ENST00000439453 SERPINB8P50452 374 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ENPEPQ07075 957 aa8.81□□□□□ -1
HPS4-206ENST00000439453 UGCGQ16739 394 aa8.81□□□□□ -1
HPS4-206ENST00000439453 SMTNL2Q2TAL5 461 aa8.81□□□□□ -1
HPS4-206ENST00000439453 TRIM60Q495X7 471 aa8.81□□□□□ -1
HPS4-206ENST00000439453 METTL7BQ6UX53 244 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ANKRD33Q7Z3H0 272 aa8.81□□□□□ -1
HPS4-206ENST00000439453 FBXW8Q8N3Y1 598 aa8.81□□□□□ -1
HPS4-206ENST00000439453 PPP1R14CQ8TAE6 165 aa8.81□□□□□ -1
HPS4-206ENST00000439453 SNRNP27Q8WVK2 155 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 SIKE1Q9BRV8 207 aa8.81□□□□□ -1
HPS4-206ENST00000439453 DNAJC16Q9Y2G8 782 aa8.81□□□□□ -1
HPS4-206ENST00000439453 HNRNPDLO14979 420 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 SIN3BO75182 1162 aa8.81□□□□□ -1
HPS4-206ENST00000439453 TOM1L1O75674 476 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ATG7O95352 703 aa8.81□□□□□ -1
HPS4-206ENST00000439453 VNN1O95497 513 aa8.81□□□□□ -1
HPS4-206ENST00000439453 C4BPAP04003 597 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 CD48P09326 243 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ZNF286BP0CG31 522 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ITGAXP20702 1163 aa8.81□□□□□ -1
HPS4-206ENST00000439453 PCSK6P29122 969 aa8.81□□□□□ -1
HPS4-206ENST00000439453 EIF3EP60228 445 aaKnown RBP8.81□□□□□ -1
HPS4-206ENST00000439453 ARCQ7LC44 396 aa8.81□□□□□ -1
HPS4-206ENST00000439453 FAM126BQ8IXS8 530 aa8.81□□□□□ -1
HPS4-206ENST00000439453 AHI1Q8N157 1196 aa8.81□□□□□ -1
HPS4-206ENST00000439453 PQLC1Q8N2U9 271 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ZNF606Q8WXB4 792 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ZNF778Q96MU6 729 aa8.81□□□□□ -1
HPS4-206ENST00000439453 PRO3102Q9H379 93 aa8.81□□□□□ -1
HPS4-206ENST00000439453 ZNF696Q9H7X3 374 aa8.81□□□□□ -1
HPS4-206ENST00000439453 CHD7Q9P2D1 2997 aa8.81□□□□□ -1
HPS4-206ENST00000439453 IGKV6D-21A0A0A0MT36 114 aa8.8□□□□□ -1
HPS4-206ENST00000439453 UGT1A9O60656 530 aa8.8□□□□□ -1
HPS4-206ENST00000439453 LYPLA1O75608 230 aaPredicted RBP8.8□□□□□ -1
HPS4-206ENST00000439453 TNFAIP8O95379 198 aa8.8□□□□□ -1
HPS4-206ENST00000439453 CRTAMO95727 393 aa8.8□□□□□ -1
HPS4-206ENST00000439453 CPT1AP50416 773 aa8.8□□□□□ -1
HPS4-206ENST00000439453 MYBPC1Q00872 1141 aa8.8□□□□□ -1
HPS4-206ENST00000439453 KRT81Q14533 505 aa8.8□□□□□ -1
HPS4-206ENST00000439453 CNGA3Q16281 694 aa8.8□□□□□ -1
HPS4-206ENST00000439453 POLNQ7Z5Q5 900 aa8.8□□□□□ -1
HPS4-206ENST00000439453 NDUFAF2Q8N183 169 aa8.8□□□□□ -1
HPS4-206ENST00000439453 NIPA2Q8N8Q9 360 aa8.8□□□□□ -1
HPS4-206ENST00000439453 BSNDQ8WZ55 320 aa8.8□□□□□ -1
HPS4-206ENST00000439453 APBB2Q92870 758 aa8.8□□□□□ -1
HPS4-206ENST00000439453 VWCEQ96DN2 955 aa8.8□□□□□ -1
HPS4-206ENST00000439453 STN1Q9H668 368 aaKnown RBP8.8□□□□□ -1
HPS4-206ENST00000439453 NRDE2Q9H7Z3 1164 aa8.8□□□□□ -1
HPS4-206ENST00000439453 UGT1A7Q9HAW7 530 aa8.8□□□□□ -1
HPS4-206ENST00000439453 UGT1A10Q9HAW8 530 aa8.8□□□□□ -1
HPS4-206ENST00000439453 UGT1A8Q9HAW9 530 aa8.8□□□□□ -1
HPS4-206ENST00000439453 C6orf203Q9P0P8 240 aaPredicted RBP8.8□□□□□ -1
HPS4-206ENST00000439453 APPL1Q9UKG1 709 aa8.8□□□□□ -1
HPS4-206ENST00000439453 RAB26Q9ULW5 256 aa8.8□□□□□ -1
HPS4-206ENST00000439453 PSMD13Q9UNM6 376 aa8.8□□□□□ -1
HPS4-206ENST00000439453 TET1Q8NFU7 2136 aa8.8□□□□□ -1
HPS4-206ENST00000439453 MAGEB3O15480 346 aa8.8□□□□□ -1
HPS4-206ENST00000439453 ITM2AO43736 263 aa8.8□□□□□ -1
HPS4-206ENST00000439453 TRMUO75648 421 aaKnown RBP8.8□□□□□ -1
HPS4-206ENST00000439453 GARTP22102 1010 aa8.8□□□□□ -1
HPS4-206ENST00000439453 SLC5A2P31639 672 aa8.8□□□□□ -1
HPS4-206ENST00000439453 CRHR1P34998 444 aa8.8□□□□□ -1
HPS4-206ENST00000439453 ATN1P54259 1190 aaPredicted RBP8.8□□□□□ -1
HPS4-206ENST00000439453 LAMC2Q13753 1193 aa8.8□□□□□ -1
HPS4-206ENST00000439453 KCNJ11Q14654 390 aa8.8□□□□□ -1
HPS4-206ENST00000439453 KCNT1Q5JUK3 1230 aa8.8□□□□□ -1
HPS4-206ENST00000439453 TSHZ1Q6ZSZ6 1077 aa8.8□□□□□ -1
HPS4-206ENST00000439453 PCSK9Q8NBP7 692 aaKnown RBP8.8□□□□□ -1
HPS4-206ENST00000439453 PIWIL2Q8TC59 973 aaKnown RBP8.8□□□□□ -1
HPS4-206ENST00000439453 CNBD2Q96M20 576 aa8.8□□□□□ -1
HPS4-206ENST00000439453 TRIM43BA6NCK2 446 aa8.8□□□□□ -1
HPS4-206ENST00000439453 RBP3P10745 1247 aa8.8□□□□□ -1
HPS4-206ENST00000439453 KDELR1P24390 212 aa8.8□□□□□ -1
HPS4-206ENST00000439453 MAGEA10P43363 369 aaPredicted RBP8.8□□□□□ -1
HPS4-206ENST00000439453 CLCN2P51788 898 aa8.8□□□□□ -1
HPS4-206ENST00000439453 WNT7BP56706 349 aa8.8□□□□□ -1
HPS4-206ENST00000439453 CLDN10P78369 228 aa8.8□□□□□ -1
HPS4-206ENST00000439453 TAP1Q03518 808 aa8.8□□□□□ -1
HPS4-206ENST00000439453 TMEM62Q0P6H9 643 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms