RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 RSAD1Q9HA92 442 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 PAK5Q9P286 719 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF510Q9Y2H8 683 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ADGRA2Q96PE1 1338 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 AP1G1O43747 822 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 FAM163BP0C2L3 166 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 IMPDH2P12268 514 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 RPL10P27635 214 aaKnown RBP13.93□□□□□ -0.18
PCNX3-202ENST00000439247 GABRB2P47870 512 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 IREB2P48200 963 aaKnown RBP13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ACTR2P61160 394 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 MS4A2Q01362 244 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 NAPRTQ6XQN6 538 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ARCQ7LC44 396 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 MCF2L2Q86YR7 1114 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 MARK4Q96L34 752 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 BTBD9Q96Q07 612 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 CEP41Q9BYV8 373 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 KIAA1217Q5T5P2 1943 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ARID2Q68CP9 1835 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 CENPFP49454 3210 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 KCNA2P16389 499 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 CDH5P33151 784 aaPredicted RBP13.93□□□□□ -0.18
PCNX3-202ENST00000439247 KLF10Q13118 480 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 TRPC3Q13507 836 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 KRT81Q14533 505 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 NRF1Q16656 503 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF699Q32M78 642 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
PCNX3-202ENST00000439247 TSHZ1Q6ZSZ6 1077 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 CMTM5Q96DZ9 223 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 CDRT15Q96T59 188 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 EBNA1BP2Q99848 306 aaKnown RBP13.93□□□□□ -0.18
PCNX3-202ENST00000439247 PKP2Q99959 881 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 EPB41L1Q9H4G0 881 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 NRDE2Q9H7Z3 1164 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 PSMD13Q9UNM6 376 aa13.93□□□□□ -0.18
PCNX3-202ENST00000439247 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 TRDMT1O14717 391 aaKnown RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 DENRO43583 198 aaKnown RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 HNRNPCP07910 306 aaKnown RBP eCLIP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 NR3C2P08235 984 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 MAP7D3Q8IWC1 876 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 RNF157Q96PX1 679 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 ADPGKQ9BRR6 497 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 FRMD8P1Q9BZ68 369 aaPredicted RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF518BQ9C0D4 1074 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 KLC2Q9H0B6 622 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 XPNPEP3Q9NQH7 507 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 PCDHGC3Q9UN70 934 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 FOXD2O60548 495 aaPredicted RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 GJA5P36382 358 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 HDAC4P56524 1084 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 YWHAEP62258 255 aaKnown RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 XIAPP98170 497 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 OLIG2Q13516 323 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 TMEM259Q4ZIN3 620 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 PLD6Q8N2A8 252 aaKnown RBP13.92□□□□□ -0.18
PCNX3-202ENST00000439247 PCDH19Q8TAB3 1148 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 PPP4R1Q8TF05 950 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 RXFP2Q8WXD0 754 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 LRGUKQ96M69 825 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 MKS1Q9NXB0 559 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 ARHGAP26Q9UNA1 814 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 SORCS3Q9UPU3 1222 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 MFHAS1Q9Y4C4 1052 aa13.92□□□□□ -0.18
PCNX3-202ENST00000439247 PLA2G6O60733 806 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 POLR2BP30876 1174 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 STT3AP46977 705 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 BCAR1P56945 870 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SESN2P58004 480 aaPredicted RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SP2Q02086 613 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 GBE1Q04446 702 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 PPP1R2P3Q6NXS1 205 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 TRIM67Q6ZTA4 783 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SNX32Q86XE0 403 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 ANKRD13AQ8IZ07 590 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 ZSCAN18Q8TBC5 510 aaPredicted RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SEMA6AQ9H2E6 1030 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SLC38A10Q9HBR0 1119 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 JPH1Q9HDC5 661 aaPredicted RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SSX2IPQ9Y2D8 614 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 XPO1O14980 1071 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 SERPINE1P05121 402 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 PSAPP07602 524 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 RALBP11234 206 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 PTPN1P18031 435 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 FGFR3P22607 806 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 DPP6P42658 865 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 ABCE1P61221 599 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 CDK18Q07002 472 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 ZNF410Q86VK4 478 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 RBM12BQ8IXT5 1001 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 BHLHE22Q8NFJ8 381 aaPredicted RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 XYLT2Q9H1B5 865 aa13.91□□□□□ -0.18
PCNX3-202ENST00000439247 NGRNQ9NPE2 291 aaKnown RBP13.91□□□□□ -0.18
PCNX3-202ENST00000439247 HES2Q9Y543 173 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms