RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 BLOC1S4Q9NUP1 217 aa11.69□□□□□ -0.54
CSTF3-203ENST00000438862 GMPR2Q9P2T1 348 aaKnown RBP11.69□□□□□ -0.54
CSTF3-203ENST00000438862 MORC2Q9Y6X9 1032 aaPredicted RBP11.69□□□□□ -0.54
CSTF3-203ENST00000438862 GOLGA8IPA6NC78 632 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 GOLGA8JA6NMD2 632 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 TLR4O00206 839 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 KIAA0391O15091 583 aaKnown RBP11.68□□□□□ -0.54
CSTF3-203ENST00000438862 BMP15O95972 392 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 SFTPCP11686 197 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 PGFP49763 221 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 TNNC1P63316 161 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 ZNF211Q13398 564 aaPredicted RBP11.68□□□□□ -0.54
CSTF3-203ENST00000438862 PKP1Q13835 747 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 MCM6Q14566 821 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 ARL13BQ3SXY8 428 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 L1TD1Q5T7N2 865 aaKnown RBP11.68□□□□□ -0.54
CSTF3-203ENST00000438862 CDCP2Q5VXM1 449 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 TMEM215Q68D42 235 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 KANSL1Q7Z3B3 1105 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 TADA2BQ86TJ2 420 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 FAM35AQ86V20 835 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 GPD1LQ8N335 351 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 ZNF276Q8N554 614 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 OR5B17Q8NGF7 314 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 SORCS1Q8WY21 1168 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 P2RY11Q96G91 374 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 ZNF396Q96N95 335 aaPredicted RBP11.68□□□□□ -0.54
CSTF3-203ENST00000438862 DCLK3Q9C098 648 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 MRPL44Q9H9J2 332 aaKnown RBP11.68□□□□□ -0.54
CSTF3-203ENST00000438862 SEL1LQ9UBV2 794 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 SUN2Q9UH99 717 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 CFAP45Q9UL16 551 aa11.68□□□□□ -0.54
CSTF3-203ENST00000438862 TPX2Q9ULW0 747 aaKnown RBP11.68□□□□□ -0.54
CSTF3-203ENST00000438862 MYO9AB2RTY4 2548 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 A0A1W2PR77 199 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 FAM47DPA6NHR8 397 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 LRRC72A6NJI9 287 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 AP1G2O75843 785 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 STC2O76061 302 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 CST3P01034 146 aaPredicted RBP11.67□□□□□ -0.54
CSTF3-203ENST00000438862 RBMS1P29558 406 aaKnown RBP11.67□□□□□ -0.54
CSTF3-203ENST00000438862 GALCP54803 685 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 NXPH1P58417 271 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 COG7P83436 770 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 KCNA1Q09470 495 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 WDR72Q3MJ13 1102 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 FNDC3BQ53EP0 1204 aaKnown RBP11.67□□□□□ -0.54
CSTF3-203ENST00000438862 ZNF776Q68DI1 518 aaPredicted RBP11.67□□□□□ -0.54
CSTF3-203ENST00000438862 PAQR9Q6ZVX9 377 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 TRAPPC11Q7Z392 1133 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 SFR1Q86XK3 245 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 WDR49Q8IV35 697 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 SYCP3Q8IZU3 236 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 CYP4X1Q8N118 509 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 NOC3LQ8WTT2 800 aaKnown RBP11.67□□□□□ -0.54
CSTF3-203ENST00000438862 RAD54LQ92698 747 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 TNIP3Q96KP6 325 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 EBF2Q9HAK2 575 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 PRSS16Q9NQE7 514 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 SCML2Q9UQR0 700 aa11.67□□□□□ -0.54
CSTF3-203ENST00000438862 ZNF233A6NK53 670 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 ENO4A6NNW6 628 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 OPA1O60313 960 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 MAGEC1O60732 1142 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 KLKB1P03952 638 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 RARGP13631 454 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 CCR5P51681 352 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 SKOR1P84550 965 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 DAB2P98082 770 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 C4orf17Q53FE4 359 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 HS1BP3Q53T59 392 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 C10orf120Q5SQS8 335 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 OR2T34Q8NGX1 318 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 GANCQ8TET4 914 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 WFIKKN2Q8TEU8 576 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 DDI1Q8WTU0 396 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 LARP4BQ92615 738 aaKnown RBP11.66□□□□□ -0.54
CSTF3-203ENST00000438862 GRAMD1AQ96CP6 724 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 SLC46A1Q96NT5 459 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 SEMA3CQ99985 751 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 ARHGAP9Q9BRR9 750 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 CBWD1Q9BRT8 395 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 PCIF1Q9H4Z3 704 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 CSNK1G1Q9HCP0 422 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.66□□□□□ -0.54
CSTF3-203ENST00000438862 OSER1Q9NX31 292 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 FBXL12Q9NXK8 326 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 FLNCQ14315 2725 aa11.66□□□□□ -0.54
CSTF3-203ENST00000438862 SIGLEC6O43699 453 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 CSO75390 466 aaKnown RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 STAU1O95793 577 aaKnown RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 GP1BAP07359 652 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 GAP43P17677 238 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 CR2P20023 1033 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
CSTF3-203ENST00000438862 KRT85P78386 507 aa11.65□□□□□ -0.54
CSTF3-203ENST00000438862 ALCAMQ13740 583 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms