RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 LRRC31Q6UY01 552 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 CCDC117Q8IWD4 279 aaPredicted RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 JOSD2Q8TAC2 188 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 FIBINQ8TAL6 211 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ZNF564Q8TBZ8 553 aaPredicted RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 PNKPQ96T60 521 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 RPP25Q9BUL9 199 aaKnown RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 NUP85Q9BW27 656 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 THAP2Q9H0W7 228 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 FBRSQ9HAH7 460 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 PIGVQ9NUD9 493 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 FBXL21Q9UKT6 434 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 ARIH1Q9Y4X5 557 aaPredicted RBP11.88□□□□□ -0.51
SNHG3-202ENST00000437681 PIAS3Q9Y6X2 628 aa11.88□□□□□ -0.51
SNHG3-202ENST00000437681 MYO1FO00160 1098 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 ATG13O75143 517 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 PSMA2P25787 234 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 HDAC4P56524 1084 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 GRSF1Q12849 480 aaKnown RBP eCLIP11.87□□□□□ -0.51
SNHG3-202ENST00000437681 GRM2Q14416 872 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 DENND1CQ8IV53 801 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 FAM172AQ8WUF8 416 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 IRF2BPLQ9H1B7 796 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 LTB4R2Q9NPC1 389 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 FZD10Q9ULW2 581 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 A0A1B0GVM2 712 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 TCAF2A6NFQ2 919 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 HOXA6P31267 233 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 EFHC2Q5JST6 749 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 GRAMD4Q6IC98 578 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 SLFN11Q7Z7L1 901 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 METTL3Q86U44 580 aaKnown RBP11.87□□□□□ -0.51
SNHG3-202ENST00000437681 LRRC8AQ8IWT6 810 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 FAM3CQ92520 227 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 TMA16Q96EY4 203 aaKnown RBP11.87□□□□□ -0.51
SNHG3-202ENST00000437681 P2RY13Q9BPV8 354 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 SMG9Q9H0W8 520 aaKnown RBP11.87□□□□□ -0.51
SNHG3-202ENST00000437681 SMPD4Q9NXE4 827 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 WNT6Q9Y6F9 365 aa11.87□□□□□ -0.51
SNHG3-202ENST00000437681 DOCK4Q8N1I0 1966 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 PIK3R2O00459 728 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 APODP05090 189 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 KRT7P08729 469 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 CISD3P0C7P0 127 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 HNRNPLP14866 589 aaKnown RBP eCLIP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 SULT2A1Q06520 285 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 SEMA3BQ13214 749 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 ZC3H12AQ5D1E8 599 aaKnown RBP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 NADSYN1Q6IA69 706 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 LMLNQ96KR4 655 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 CFAP57Q96MR6 1250 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 CALCOCO1Q9P1Z2 691 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 RAD54BQ9Y620 910 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 MUC22E2RYF6 1773 aaPredicted RBP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 NARSO43776 548 aaKnown RBP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 PAGE1O75459 146 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 LUC7L3O95232 432 aaKnown RBP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 ARSAP15289 507 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 AOC1P19801 751 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 OPRD1P41143 372 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 PDK2Q15119 407 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 ERMARDQ5T6L9 678 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 PJA1Q8NG27 643 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 RNF34Q969K3 372 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 TKTL2Q9H0I9 626 aa11.86□□□□□ -0.51
SNHG3-202ENST00000437681 DDX56Q9NY93 547 aaKnown RBP11.86□□□□□ -0.51
SNHG3-202ENST00000437681 CHD5Q8TDI0 1954 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 PSTPIP1O43586 416 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 RHOQP17081 205 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 DPYSL2Q16555 572 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 LY6G5CQ5SRR4 150 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 LRRC49Q8IUZ0 686 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 AHI1Q8N157 1196 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 LZTR1Q8N653 840 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 TTC17Q96AE7 1141 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 ACDQ96AP0 544 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 EPAS1Q99814 870 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 CATSPERBQ9H7T0 1116 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 KIAA1522Q9P206 1035 aaPredicted RBP11.85□□□□□ -0.51
SNHG3-202ENST00000437681 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 DEC1Q9P2X7 70 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 HS3ST4Q9Y661 456 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 SHISA7A6NL88 538 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 MSI1O43347 362 aaKnown RBP11.85□□□□□ -0.51
SNHG3-202ENST00000437681 PRPSAP2O60256 369 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 SRPRAP08240 638 aaKnown RBP11.85□□□□□ -0.51
SNHG3-202ENST00000437681 IRF1P10914 325 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 TYRP14679 529 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 HOXD9P28356 352 aaPredicted RBP11.85□□□□□ -0.51
SNHG3-202ENST00000437681 RPL7AP62424 266 aaKnown RBP11.85□□□□□ -0.51
SNHG3-202ENST00000437681 ZNF252P-AS1Q0IIN9 211 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 ENPP2Q13822 863 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 TPRG1Q6ZUI0 275 aa11.85□□□□□ -0.51
SNHG3-202ENST00000437681 FBXL6Q8N531 539 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms