RNA–Protein interactions for RNA: ENST00000436894.1

NCL-204, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-204ENST00000436894 PHGDHO43175 533 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 TEX33O43247 280 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 ORC4O43929 436 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 RANBP6O60518 1105 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 PLATP00750 562 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 STAG3L1P0CL83 205 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 HSPD1P10809 573 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 PCP11498 1178 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 MYF5P13349 255 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 HOXB8P17481 243 aaPredicted RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 HOXC8P31273 242 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 SLC16A2P36021 539 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 RPS19P39019 145 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 PIK3CGP48736 1102 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 VCPP55072 806 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 SOX8P57073 446 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 NOMO3P69849 1222 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 BIRC2Q13490 618 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 UBXN2BQ14CS0 331 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 SURF1Q15526 300 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 CELF3Q5SZQ8 465 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 UBXN11Q5T124 520 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 ARHGEF16Q5VV41 709 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 TMEM184AQ6ZMB5 413 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 ASCL5Q7RTU5 278 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 TICAM2Q86XR7 235 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 SYT12Q8IV01 421 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 ADSSL1Q8N142 457 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 D2HGDHQ8N465 521 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 IL17RDQ8NFM7 739 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 SPPL3Q8TCT6 385 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 SUSD6Q92537 303 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 TFAP2CQ92754 450 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 ZNF689Q96CS4 500 aaPredicted RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 PGBD4Q96DM1 585 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 RPGRIP1Q96KN7 1286 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 FAM167AQ96KS9 214 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 NECTIN4Q96NY8 510 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 NEK1Q96PY6 1258 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 FTHL17Q9BXU8 183 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 NELFAQ9H3P2 528 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 TLE6Q9H808 572 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 MLXIPQ9HAP2 919 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 MRPS18AQ9NVS2 196 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 ANAPC4Q9UJX5 808 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 TPCN1Q9ULQ1 816 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 SORCS3Q9UPU3 1222 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 CORO2BQ9UQ03 480 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
NCL-204ENST00000436894 MRPL11Q9Y3B7 192 aaKnown RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 USP15Q9Y4E8 981 aaPredicted RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.03□□□□□ -1.6
NCL-204ENST00000436894 SQORQ9Y6N5 450 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 ACACBO00763 2458 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 KIAA1217Q5T5P2 1943 aa5.03□□□□□ -1.6
NCL-204ENST00000436894 EP300Q09472 2414 aaPredicted RBP5.03□□□□□ -1.6
NCL-204ENST00000436894 NCOR2Q9Y618 2525 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 NRCAMQ92823 1304 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 F8W8V4 182 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 MYO1FO00160 1098 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 KPNA5O15131 536 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 LINC01565O15544 149 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 PJA2O43164 708 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SLC43A1O75387 559 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 STAM2O75886 525 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 ITGB1P05556 798 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 LINC00271P0C7V0 271 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 ZNF286BP0CG31 522 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SMIM10L2AP0DMW4 78 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SMIM10L2BP0DMW5 78 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SNHG28P0DPA3 235 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 PDHBP11177 359 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SLC7A1P30825 629 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 NRIP1P48552 1158 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 PRIM2P49643 509 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 PSMC1P62191 440 aaKnown RBP5.02□□□□□ -1.61
NCL-204ENST00000436894 ZNF543Q08ER8 600 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 PUM1Q14671 1186 aaKnown RBP eCLIP5.02□□□□□ -1.617e-49■□□□□ 11.3
NCL-204ENST00000436894 POLD3Q15054 466 aaPredicted RBP5.02□□□□□ -1.61
NCL-204ENST00000436894 BRD3Q15059 726 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 ATXN7L2Q5T6C5 722 aaPredicted RBP5.02□□□□□ -1.61
NCL-204ENST00000436894 UTP14CQ5TAP6 766 aaKnown RBP5.02□□□□□ -1.61
NCL-204ENST00000436894 C1QL3Q5VWW1 255 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 TAF2Q6P1X5 1199 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 DOK3Q7L591 496 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 DGLUCYQ7Z3D6 616 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 BRIX1Q8TDN6 353 aaKnown RBP5.02□□□□□ -1.61
NCL-204ENST00000436894 ATP8B4Q8TF62 1192 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 POF1BQ8WVV4 589 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 ST8SIA2Q92186 375 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SPATA33Q96N06 139 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 TAAR1Q96RJ0 339 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 NEU1Q99519 415 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 TMEM47Q9BQJ4 181 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 C16orf70Q9BSU1 422 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 PACSIN1Q9BY11 444 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 RNPEPQ9H4A4 650 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 RSAD1Q9HA92 442 aa5.02□□□□□ -1.61
NCL-204ENST00000436894 SARS2Q9NP81 518 aaKnown RBP5.02□□□□□ -1.61
NCL-204ENST00000436894 PARD6AQ9NPB6 346 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms