RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ADAM7Q9H2U9 754 aa23.76■■□□□ 1.39
CPSF4-204ENST00000436336 LSM7Q9UK45 103 aaKnown RBP23.76■■□□□ 1.39
CPSF4-204ENST00000436336 PHF2O75151 1096 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 EPHB2P29323 1055 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 RAP1GAP2Q684P5 730 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 NADSYN1Q6IA69 706 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 DENND4AQ7Z401 1863 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 C12orf50Q8NA57 414 aaPredicted RBP23.75■■□□□ 1.39
CPSF4-204ENST00000436336 ING5Q8WYH8 240 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 WBP2Q969T9 261 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 CLDND1Q9NY35 253 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 STOML2Q9UJZ1 356 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 AGO1Q9UL18 857 aaKnown RBP23.75■■□□□ 1.39
CPSF4-204ENST00000436336 NEU3Q9UQ49 428 aa23.75■■□□□ 1.39
CPSF4-204ENST00000436336 EFCAB8A8MWE9 144 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 FGF10O15520 208 aaPredicted RBP23.74■■□□□ 1.39
CPSF4-204ENST00000436336 TBX10O75333 385 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 ERCC2P18074 760 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 FSHRP23945 695 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 COL19A1Q14993 1142 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 CCNG2Q16589 344 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 NCBP2-AS2Q69YL0 99 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 CES5AQ6NT32 575 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 C14orf80Q86SX3 495 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 CHSY1Q86X52 802 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 ZNF683Q8IZ20 524 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 MMGT1Q8N4V1 131 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 FAM161BQ96MY7 647 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 FRMD8P1Q9BZ68 369 aaPredicted RBP23.74■■□□□ 1.39
CPSF4-204ENST00000436336 LRRC19Q9H756 370 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 CATSPERBQ9H7T0 1116 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 PPARGC1AQ9UBK2 798 aaKnown RBP23.74■■□□□ 1.39
CPSF4-204ENST00000436336 VANGL2Q9ULK5 521 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 ZNF510Q9Y2H8 683 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 R3HDM2Q9Y2K5 976 aaKnown RBP23.74■■□□□ 1.39
CPSF4-204ENST00000436336 SH3BP1Q9Y3L3 701 aa23.74■■□□□ 1.39
CPSF4-204ENST00000436336 LEFTY2O00292 366 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 DCLK1O15075 740 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 GREM1O60565 184 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 TACR2P21452 398 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 WEE1P30291 646 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 TUBB4BP68371 445 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 FAM133BQ5BKY9 247 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 ARTNQ5T4W7 220 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 RWDD4Q6NW29 188 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 Q6ZNB5 142 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 HTR3DQ70Z44 454 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 C1orf54Q8WWF1 131 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 P3H4Q92791 437 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 PABPC5Q96DU9 382 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 DDX50Q9BQ39 737 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 DDX47Q9H0S4 455 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 TDP1Q9NUW8 608 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 CFAP97Q9P2B7 532 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 IGLV3-10A0A075B6K4 115 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 GOLGA6L7A0A1B0GV03 622 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 F5H5T6 163 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 CHRNA3P32297 505 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 ATAT1Q5SQI0 421 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 ADGRF1Q5T601 910 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 FBXL22Q6P050 247 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 NOA1Q8NC60 698 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 ACTL9Q8TC94 416 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 USP13Q92995 863 aaPredicted RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 MAGOHBQ96A72 148 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 HAUS1Q96CS2 278 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 ZSWIM3Q96MP5 696 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 SMG9Q9H0W8 520 aaKnown RBP23.73■■□□□ 1.39
CPSF4-204ENST00000436336 S1PR5Q9H228 398 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 ETNK2Q9NVF9 386 aa23.73■■□□□ 1.39
CPSF4-204ENST00000436336 TCF3P15923 654 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 OTUD4Q01804 1114 aaKnown RBP23.72■■□□□ 1.39
CPSF4-204ENST00000436336 DLX2Q07687 328 aaPredicted RBP23.72■■□□□ 1.39
CPSF4-204ENST00000436336 CBX2Q14781 532 aaPredicted RBP23.72■■□□□ 1.39
CPSF4-204ENST00000436336 PAFAH1B3Q15102 231 aaKnown RBP23.72■■□□□ 1.39
CPSF4-204ENST00000436336 C5orf22Q49AR2 442 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 TMCO3Q6UWJ1 677 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 KLHL7Q8IXQ5 586 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 SH3RF2Q8TEC5 729 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 KRT12Q99456 494 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 ZYG11BQ9C0D3 744 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 NUP205Q92621 2012 aa23.72■■□□□ 1.39
CPSF4-204ENST00000436336 DRGXA6NNA5 263 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 PECAM1P16284 738 aaPredicted RBP23.71■■□□□ 1.39
CPSF4-204ENST00000436336 SLC6A4P31645 630 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 LTBRP36941 435 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 NR2C2P49116 596 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 DRICH1Q6PGQ1 229 aaPredicted RBP23.71■■□□□ 1.39
CPSF4-204ENST00000436336 C1orf228Q6PIY5 440 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 POTEHQ6S545 545 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 NPAS3Q8IXF0 933 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 ATG4AQ8WYN0 398 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 RUNDC3BQ96NL0 473 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 SAE1Q9UBE0 346 aaPredicted RBP23.71■■□□□ 1.39
CPSF4-204ENST00000436336 CCL26Q9Y258 94 aa23.71■■□□□ 1.39
CPSF4-204ENST00000436336 E2F8A0AVK6 867 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 WASH4PA8MWX3 477 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 LIASO43766 372 aa23.7■■□□□ 1.39
CPSF4-204ENST00000436336 COILP38432 576 aaPredicted RBP23.7■■□□□ 1.39
CPSF4-204ENST00000436336 FNTAP49354 379 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms