RNA–Protein interactions for RNA: ENST00000435216.1

CDCA4P4-201, Transcript of cell division cycle associated 4 pseudogene 4, humanhuman

BASIC

Gene CDCA4P4, Length 680 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4P4-201ENST00000435216 CFAP52Q8N1V2 620 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 WFIKKN2Q8TEU8 576 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 DNASE2BQ8WZ79 361 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 FAM149B1Q96BN6 582 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 FCRL2Q96LA5 508 aaPredicted RBP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 HSFY1Q96LI6 401 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 CRACR2AQ9BSW2 395 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 NUP58Q9BVL2 599 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 NUCKS1Q9H1E3 243 aaKnown RBP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 LHX5Q9H2C1 402 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 C6orf106Q9H6K1 298 aaPredicted RBP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 IL21RQ9HBE5 538 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 UBE2TQ9NPD8 197 aaPredicted RBP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 PRSS16Q9NQE7 514 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 DNAAF2Q9NVR5 837 aaKnown RBP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 CYTH4Q9UIA0 394 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 RALYQ9UKM9 306 aaKnown RBP13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 KLK13Q9UKR3 277 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 PCNX2A6NKB5 2137 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 SPEGQ15772 3267 aa13.61□□□□□ -0.23
CDCA4P4-201ENST00000435216 A0A1B0GTW7 788 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 UPK3BL1B0FP48 263 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 UPK3BL2E5RIL1 263 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 FBXO21O94952 628 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 GNA14O95837 355 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 IGLV3-19P01714 112 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 DLDP09622 509 aaKnown RBP13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 POLR2EP19388 210 aaKnown RBP13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 RPS14P62263 151 aaKnown RBP13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 BNC1Q01954 994 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 RING1Q06587 406 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 E2F5Q15329 346 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 CAMK4Q16566 473 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 MMS22LQ6ZRQ5 1243 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 TAC4Q86UU9 113 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 CHCHD4Q8N4Q1 142 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 CADM4Q8NFZ8 388 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 TMEM121BQ9BXQ6 578 aaPredicted RBP13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 TJP2Q9UDY2 1190 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 XPO7Q9UIA9 1087 aaKnown RBP13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 ZMIZ1Q9ULJ6 1067 aa13.6□□□□□ -0.23
CDCA4P4-201ENST00000435216 CHD6Q8TD26 2715 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 E5RJQ4 531 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 BCAT2O15382 392 aaPredicted RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 PAPSS1O43252 624 aaPredicted RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 THAP12O43422 761 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 ATP5BP06576 529 aaKnown RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 MARSP56192 900 aaKnown RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 PITX1P78337 314 aaPredicted RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 TAF5Q15542 800 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 ARHGAP44Q17R89 818 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 FSCBQ5H9T9 825 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 FOXR2Q6PJQ5 311 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 NAXDQ8IW45 347 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 PNPLA1Q8N8W4 532 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 HJURPQ8NCD3 748 aaPredicted RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 GATA6Q92908 595 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 LMLNQ96KR4 655 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 SERPINB11Q96P15 392 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 CNTN6Q9UQ52 1028 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 TLR6Q9Y2C9 796 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
CDCA4P4-201ENST00000435216 A0A1B0GVT2 93 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 CAPN9O14815 690 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 IRAK2O43187 625 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 DNTTP04053 509 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 SLC9A1P19634 815 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 GNA15P30679 374 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 USP8P40818 1118 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 CSKP41240 450 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 CTSOP43234 321 aaPredicted RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 RPL34P49207 117 aaKnown RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 CSNK1EP49674 416 aaKnown RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 TRIP6Q15654 476 aaKnown RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 DCAF6Q58WW2 860 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 MS4A13Q5J8X5 152 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 MPP7Q5T2T1 576 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 LAYNQ6UX15 382 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 DHX40Q8IX18 779 aaKnown RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 C1orf216Q8TAB5 229 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 FIBINQ8TAL6 211 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 ZNF606Q8WXB4 792 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 MYO19Q96H55 970 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 SLC39A13Q96H72 371 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 MED15Q96RN5 788 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 SLC4A5Q9BY07 1137 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 GAREM1Q9H706 876 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 FNDC3AQ9Y2H6 1198 aaKnown RBP13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 NFE2L3Q9Y4A8 694 aa13.58□□□□□ -0.24
CDCA4P4-201ENST00000435216 TMEM131Q92545 1883 aa13.57□□□□□ -0.24
CDCA4P4-201ENST00000435216 SYNJ2BP-COX16A0A087WUM0 186 aa13.57□□□□□ -0.24
CDCA4P4-201ENST00000435216 TYW5A2RUC4 315 aaKnown RBP13.57□□□□□ -0.24
CDCA4P4-201ENST00000435216 BECN2A8MW95 431 aa13.57□□□□□ -0.24
CDCA4P4-201ENST00000435216 SIN3BO75182 1162 aa13.57□□□□□ -0.24
CDCA4P4-201ENST00000435216 SEMA4FO95754 770 aa13.57□□□□□ -0.24
CDCA4P4-201ENST00000435216 ACADSBP45954 432 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms