RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 PBKQ96KB5 322 aa23.98■■□□□ 1.43
SMARCAL1-208ENST00000434435 OSBPL9Q96SU4 736 aa23.98■■□□□ 1.43
SMARCAL1-208ENST00000434435 VANGL2Q9ULK5 521 aa23.98■■□□□ 1.43
SMARCAL1-208ENST00000434435 GOLGA6L7A0A1B0GV03 622 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 ZNF487B1APH4 448 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 FAM72CH0Y354 149 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 LRIG2O94898 1065 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 CD48P09326 243 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 PYGMP11217 842 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 SLC6A4P31645 630 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 CHKAP35790 457 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 ZNF211Q13398 564 aaPredicted RBP23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 FAM72AQ5TYM5 149 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 MANEALQ5VSG8 457 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 FAM72DQ6L9T8 149 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 MFSD7Q6UXD7 560 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 VITQ6UXI7 678 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 SPOCD1Q6ZMY3 1216 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 FAM72BQ86X60 149 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 LGI2Q8N0V4 545 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 CPXM2Q8N436 756 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 TSC1Q92574 1164 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 TBC1D31Q96DN5 1066 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 C5orf42Q9H799 3197 aa23.97■■□□□ 1.43
SMARCAL1-208ENST00000434435 C3orf70A6NLC5 250 aaPredicted RBP23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 C2CD4DB7Z1M9 353 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 SRGAP2O75044 1071 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 ECI2O75521 394 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 GOT1P17174 413 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 CXCR5P32302 372 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 IFNAR2P48551 515 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 PPP2R5EQ16537 467 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 TFDP3Q5H9I0 405 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 RABGAP1LQ5R372 815 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 FBXL22Q6P050 247 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 C14orf80Q86SX3 495 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 ZNF683Q8IZ20 524 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 PLCD3Q8N3E9 789 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 KIF18AQ8NI77 898 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 DEPDC1BQ8WUY9 529 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 LRRC3BQ96PB8 259 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 CSPG4P5Q96PW8 444 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 KXD1Q9BQD3 176 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 PRDM6Q9NQX0 595 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 THG1LQ9NWX6 298 aaKnown RBP23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 CWC15Q9P013 229 aaKnown RBP23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 SAR1BQ9Y6B6 198 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 WNT6Q9Y6F9 365 aa23.96■■□□□ 1.43
SMARCAL1-208ENST00000434435 EYSQ5T1H1 3165 aa23.95■■□□□ 1.43
SMARCAL1-208ENST00000434435 TYW5A2RUC4 315 aaKnown RBP23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 CES2O00748 559 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 DAPK3O43293 454 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 PRLRP16471 622 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 PTPN7P35236 360 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 CDKN2BP42772 138 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 HCAR3P49019 387 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 TFF2Q03403 129 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 MMRN1Q13201 1228 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 RFWD3Q6PCD5 774 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 PARM1Q6UWI2 310 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 RFX8Q6ZV50 586 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 MFSD6LQ8IWD5 586 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 YAF2Q8IY57 180 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 OSCP1Q8WVF1 389 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 FGF14Q92915 247 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 FAF2Q96CS3 445 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 RPRD1AQ96P16 312 aaPredicted RBP23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 DUS2Q9NX74 493 aaKnown RBP23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 STIM2Q9P246 746 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 THEGQ9P2T0 379 aa23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 PPARGC1AQ9UBK2 798 aaKnown RBP23.95■■□□□ 1.42
SMARCAL1-208ENST00000434435 MIA3Q5JRA6 1907 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 TICRRQ7Z2Z1 1910 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 IGLV3-10A0A075B6K4 115 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 FGF10O15520 208 aaPredicted RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 EPHB2P29323 1055 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 HOXC13P31276 330 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 VCPP55072 806 aaKnown RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 AMPD2Q01433 879 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 HTR4Q13639 388 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 TAZQ16635 292 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 TTC39BQ5VTQ0 682 aaPredicted RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 RWDD4Q6NW29 188 aaKnown RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 AADACL2Q6P093 401 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 HJURPQ8NCD3 748 aaPredicted RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 ST13P5Q8NFI4 369 aaPredicted RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 RPGRIP1Q96KN7 1286 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 PRICKLE1Q96MT3 831 aaPredicted RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 MAK16Q9BXY0 300 aaKnown RBP23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 OSBPL8Q9BZF1 889 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 CATSPERBQ9H7T0 1116 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 NEU3Q9UQ49 428 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 NUMBLQ9Y6R0 609 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 NUP205Q92621 2012 aa23.94■■□□□ 1.42
SMARCAL1-208ENST00000434435 CHD5Q8TDI0 1954 aa23.93■■□□□ 1.42
SMARCAL1-208ENST00000434435 hCG_1818297A0A087WSY0 165 aa23.93■■□□□ 1.42
SMARCAL1-208ENST00000434435 ANHXE9PGG2 379 aa23.93■■□□□ 1.42
SMARCAL1-208ENST00000434435 TRDMT1O14717 391 aaKnown RBP23.93■■□□□ 1.42
SMARCAL1-208ENST00000434435 CEP104O60308 925 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms