RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 CRTAC1Q9NQ79 661 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 ARHGEF4Q9NR80 690 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 USH1CQ9Y6N9 552 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 SNUPNO95149 360 aaKnown RBP16.02■□□□□ 0.16
SCARF1-203ENST00000434376 ZCCHC18P0CG32 403 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 MYL2P10916 166 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 ERCC2P18074 760 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 RASSF2P50749 326 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 CRHR2Q13324 411 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 EFHC2Q5JST6 749 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 FAM219BQ5XKK7 198 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 CLEC20AQ6ZU45 233 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 NUDCD3Q8IVD9 361 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 LINC01465Q8N7H1 131 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 SLC4A5Q9BY07 1137 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 NUMBLQ9Y6R0 609 aa16.02■□□□□ 0.16
SCARF1-203ENST00000434376 BAG2O95816 211 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 ENO1P06733 434 aaKnown RBP16.02■□□□□ 0.15
SCARF1-203ENST00000434376 TPBGLP0DKB5 382 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 TROVE2P10155 538 aaKnown RBP eCLIP16.02■□□□□ 0.15
SCARF1-203ENST00000434376 ALADP13716 330 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 NPR3P17342 541 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 FAM187BQ17R55 369 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 CERCAMQ5T4B2 595 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 TMEM110Q86TL2 294 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 ADAM2Q99965 735 aa16.02■□□□□ 0.15
SCARF1-203ENST00000434376 CCL22O00626 93 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 NVLO15381 856 aaKnown RBP16.01■□□□□ 0.15
SCARF1-203ENST00000434376 CD4P01730 458 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 FLT3LGP49771 235 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 SEPT6Q14141 434 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 SV2CQ496J9 727 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 UBXN11Q5T124 520 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 NCBP2-AS2Q69YL0 99 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 ASRGL1Q7L266 308 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 MIB1Q86YT6 1006 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 BHMTQ93088 406 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 TKTL2Q9H0I9 626 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 FAM105AQ9NUU6 356 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 SLC15A5A6NIM6 579 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 KIF3CO14782 793 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 BUD23O43709 281 aaKnown RBP16.01■□□□□ 0.15
SCARF1-203ENST00000434376 PMPCBO75439 489 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 KRT37O76014 449 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 ARFIP2P53365 341 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 ATXN3P54252 364 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-203ENST00000434376 PEX6Q13608 980 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 TIGD5Q53EQ6 642 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 HSP90AA5PQ58FG0 334 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 OTOP3Q7RTS5 596 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 RNF135Q8IUD6 432 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 POU5F2Q8N7G0 328 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 IRAK4Q9NWZ3 460 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 SYBUQ9NX95 663 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 MTMR10Q9NXD2 777 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 MPP6Q9NZW5 540 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 PARP14Q460N5 1801 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 LOC100653049A0A140TA62 436 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 KRT34O76011 436 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 KRT36O76013 467 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 ZNF865P0CJ78 1059 aaPredicted RBP16.01■□□□□ 0.15
SCARF1-203ENST00000434376 GRIK1P39086 918 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 KHDC1Q4VXA5 237 aaKnown RBP16.01■□□□□ 0.15
SCARF1-203ENST00000434376 ARHGAP36Q6ZRI8 547 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 MFSD3Q96ES6 412 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 AGAP2Q99490 1192 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 LGALS13Q9UHV8 139 aa16.01■□□□□ 0.15
SCARF1-203ENST00000434376 SERPINB4P48594 390 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 PGFP49763 221 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 CPT1AP50416 773 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 SLC45A4Q5BKX6 768 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 TNFAIP8L3Q5GJ75 292 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 NOMO2Q5JPE7 1267 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 DRICH1Q6PGQ1 229 aaPredicted RBP16■□□□□ 0.15
SCARF1-203ENST00000434376 SLC25A41Q8N5S1 370 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 ZNF778Q96MU6 729 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 HCSTQ9UBK5 93 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 TEX264Q9Y6I9 313 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 ARL5CA6NH57 179 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 MEI4A8MW99 385 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 GYG2O15488 501 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 KCNJ11Q14654 390 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 PDK2Q15119 407 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 LRRC36Q1X8D7 754 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 RAPH1Q70E73 1250 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 CDKL3Q8IVW4 592 aaPredicted RBP16■□□□□ 0.15
SCARF1-203ENST00000434376 DCLK2Q8N568 766 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 IPMKQ8NFU5 416 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 TMEM120AQ9BXJ8 343 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 VCXQ9H320 206 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 SMG5Q9UPR3 1016 aaKnown RBP16■□□□□ 0.15
SCARF1-203ENST00000434376 PTPRFP10586 1907 aa16■□□□□ 0.15
SCARF1-203ENST00000434376 I6L893 689 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-203ENST00000434376 XPOTO43592 962 aaKnown RBP15.99■□□□□ 0.15
SCARF1-203ENST00000434376 EDF1O60869 148 aaKnown RBP15.99■□□□□ 0.15
SCARF1-203ENST00000434376 ZMPSTE24O75844 475 aa15.99■□□□□ 0.15
SCARF1-203ENST00000434376 DCTN3O75935 186 aa15.99■□□□□ 0.15
SCARF1-203ENST00000434376 MT-CYBP00156 380 aaPredicted RBP15.99■□□□□ 0.15
SCARF1-203ENST00000434376 CTGFP29279 349 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms