RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 PDE1CQ14123 709 aaPredicted RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 TRIM68Q6AZZ1 485 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 DENND5BQ6ZUT9 1274 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 LCA5Q86VQ0 697 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 CCDC185Q8N715 623 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 NRG4Q8WWG1 115 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 SCG3Q8WXD2 468 aaKnown RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 FAM161BQ96MY7 647 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 ZNF184Q99676 751 aaPredicted RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 HNRNPABQ99729 332 aaKnown RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 STAP1Q9ULZ2 295 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 APOBEC2Q9Y235 224 aaKnown RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 FNDC1Q4ZHG4 1894 aaPredicted RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 AP3B1O00203 1094 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 RNF103O00237 685 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 CCNT2O60583 730 aaKnown RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 AMPD1P23109 780 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 WARSP23381 471 aaKnown RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 DNAJB1P25685 340 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 GNL1P36915 607 aaPredicted RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 HADHAP40939 763 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 HCAR3P49019 387 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 BTKQ06187 659 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 GRIK3Q13003 919 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 PCLAFQ15004 111 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 SV2CQ496J9 727 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 N4BP2L1Q5TBK1 243 aaPredicted RBP14.04□□□□□ -0.16
COL6A3-207ENST00000433762 TOP6BLQ8N6T0 577 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 RNF139Q8WU17 664 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 JADE3Q92613 823 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 NTAN1Q96AB6 310 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 RILPQ96NA2 401 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 NPY6RQ99463 290 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 SNX25Q9H3E2 840 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 SNTG2Q9NY99 539 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 MID2Q9UJV3 735 aa14.04□□□□□ -0.16
COL6A3-207ENST00000433762 UTRNP46939 3433 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 KPNA7A9QM74 516 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 TMEM114B3SHH9 223 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 TPP1O14773 563 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 GOT1P17174 413 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 CPOXP36551 454 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 XIAPP98170 497 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 SCAPQ12770 1279 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 DPYSQ14117 519 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 P2RY11Q96G91 374 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 SLC2A13Q96QE2 648 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 C20orf27Q9GZN8 174 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 TUBGCP4Q9UGJ1 667 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 SMIM35A0A1B0GVV1 85 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 C2orf71A6NGG8 1288 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 ADM5C9JUS6 153 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 PPEF2O14830 753 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 MFSD11O43934 449 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 LINGO3P0C6S8 592 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 CYP2C9P11712 490 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 GRIA1P42261 906 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 TAF6P49848 677 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 SERPINB8P50452 374 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 PRKAA2P54646 552 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 RPL26P61254 145 aaKnown RBP14.03□□□□□ -0.16
COL6A3-207ENST00000433762 DEUP1Q05D60 604 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 DUSP28Q4G0W2 176 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 METTL21CQ5VZV1 264 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 CATSPER4Q7RTX7 472 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 KIRREL3Q8IZU9 778 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 GPRC5AQ8NFJ5 357 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 SREK1Q8WXA9 508 aaKnown RBP14.03□□□□□ -0.16
COL6A3-207ENST00000433762 CERS2Q96G23 380 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 FAM167BQ9BTA0 163 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 LRRC40Q9H9A6 602 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
COL6A3-207ENST00000433762 TXNDC16Q9P2K2 825 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 COPG2Q9UBF2 871 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 SCOCQ9UIL1 159 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 DNAJC16Q9Y2G8 782 aa14.03□□□□□ -0.16
COL6A3-207ENST00000433762 CCDC195A0A1B0GUA6 201 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 MAGEB16A2A368 324 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 MAGEA13PA6NCF6 341 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 PRR5-ARHGAP8B1AHC4 643 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 C9IYK1 514 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 FBXO21O94952 628 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 MPOP05164 745 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 MMP3P08254 477 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 ZNF286BP0CG31 522 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 SPRP35270 261 aaPredicted RBP14.02□□□□□ -0.16
COL6A3-207ENST00000433762 SULT1E1P49888 294 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 GJA9P57773 515 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 ARHGAP8P85298 464 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 DGKDQ16760 1214 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 RIPOR1Q6ZS17 1223 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 APPL2Q8NEU8 664 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 CLEC4CQ8WTT0 213 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 CMTM5Q96DZ9 223 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 CLMNQ96JQ2 1002 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 DUSP16Q9BY84 665 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 DPEP3Q9H4B8 488 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 RRN3Q9NYV6 651 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 SLC7A8Q9UHI5 535 aa14.02□□□□□ -0.16
COL6A3-207ENST00000433762 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms