RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 NUP85Q9BW27 656 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 CIPCQ9C0C6 399 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 CHRDQ9H2X0 955 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 TMPRSS4Q9NRS4 437 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 ARHGEF38Q9NXL2 777 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 CTTNBP2NLQ9P2B4 639 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 ANAPC7Q9UJX3 599 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 HS3ST4Q9Y661 456 aa16.05■□□□□ 0.16
TREX1-201ENST00000433541 TCRBV5S1A1TA0A578 114 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 SRGAP2O75044 1071 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 ATG13O75143 517 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 CYLC1P35663 651 aaPredicted RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 SSR1P43307 286 aaKnown RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 MESP2Q0VG99 397 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 MTAPQ13126 283 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 EIF4EBP2Q13542 120 aaPredicted RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 AUHQ13825 339 aaKnown RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 SPA17Q15506 151 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 RAB6CQ53S08 254 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 PPP1R15BQ5SWA1 713 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 TTC39BQ5VTQ0 682 aaPredicted RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 ANKS1BQ7Z6G8 1248 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 SFTPA1Q8IWL2 248 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 ZNF557Q8N988 423 aaPredicted RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 UCMAQ8WVF2 138 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 ACDQ96AP0 544 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 PRRX2Q99811 253 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 IER2Q9BTL4 223 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 SLC2A11Q9BYW1 496 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 IRX2Q9BZI1 471 aaPredicted RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 RAB6CQ9H0N0 254 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
TREX1-201ENST00000433541 ABCB8Q9NUT2 735 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 IMPACTQ9P2X3 320 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 SNX10Q9Y5X0 201 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 DOCK4Q8N1I0 1966 aa16.04■□□□□ 0.16
TREX1-201ENST00000433541 CACNA1IQ9P0X4 2223 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 TMEM191CA6NGB0 347 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 TNFRSF4P43489 277 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 CCR3P51677 355 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 HDAC4P56524 1084 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 EFHC2Q5JST6 749 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 MPP7Q5T2T1 576 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 ACBD5Q5T8D3 534 aaPredicted RBP16.03■□□□□ 0.16
TREX1-201ENST00000433541 FBXL22Q6P050 247 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 SLFN11Q7Z7L1 901 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 C1orf210Q8IVY1 113 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 ZNF687Q8N1G0 1237 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 SPEM1Q8N4L4 309 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 CCDC33Q8N5R6 958 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 ZNF513Q8N8E2 541 aaPredicted RBP16.03■□□□□ 0.16
TREX1-201ENST00000433541 PACSIN1Q9BY11 444 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 GRPEL1Q9HAV7 217 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 DLGAP2Q9P1A6 1054 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 GGA2Q9UJY4 613 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
TREX1-201ENST00000433541 A0A1B0GVM2 712 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 TCAF2A6NFQ2 919 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 K7EQS6 105 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 GALR2O43603 387 aaPredicted RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 PRPSAP2O60256 369 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 ENDOD1O94919 500 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 LUC7L3O95232 432 aaKnown RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 MOCS3O95396 460 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 KLF8O95600 359 aaPredicted RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 ADRA1BP35368 520 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 CXCL12P48061 93 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 OGDHQ02218 1023 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 FZD5Q13467 585 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 ANGPT1Q15389 498 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 GEN1Q17RS7 908 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 SDE2Q6IQ49 451 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 RWDD4Q6NW29 188 aaKnown RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 CHST9Q7L1S5 443 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 TRMT11Q7Z4G4 463 aaKnown RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 CCAR2Q8N163 923 aaKnown RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 CCDC185Q8N715 623 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 ZNF564Q8TBZ8 553 aaPredicted RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 ANP32BQ92688 251 aaKnown RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 ARHGEF26Q96DR7 871 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 MYEOVQ96EZ4 313 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 HAPLN3Q96S86 360 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 PRMT1Q99873 361 aaKnown RBP16.02■□□□□ 0.16
TREX1-201ENST00000433541 TRIM7Q9C029 511 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 ZDHHC4Q9NPG8 344 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 ANLNQ9NQW6 1124 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 PCSK1NQ9UHG2 260 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 IP6K2Q9UHH9 426 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 CLEC4EQ9ULY5 219 aa16.02■□□□□ 0.16
TREX1-201ENST00000433541 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.01■□□□□ 0.15
TREX1-201ENST00000433541 TMEM110-MUSTN1A8MSY1 372 aa16.01■□□□□ 0.15
TREX1-201ENST00000433541 E9PAM4 449 aa16.01■□□□□ 0.15
TREX1-201ENST00000433541 MYO1FO00160 1098 aa16.01■□□□□ 0.15
TREX1-201ENST00000433541 CYP1A2P05177 515 aa16.01■□□□□ 0.15
TREX1-201ENST00000433541 PABPC1P11940 636 aaKnown RBP16.01■□□□□ 0.15
TREX1-201ENST00000433541 POLR2EP19388 210 aaKnown RBP16.01■□□□□ 0.15
TREX1-201ENST00000433541 NUMBP49757 651 aa16.01■□□□□ 0.15
TREX1-201ENST00000433541 NUBP1P53384 320 aa16.01■□□□□ 0.15
TREX1-201ENST00000433541 MRPS21P82921 87 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms