RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 AGO2Q9UKV8 859 aaKnown RBP3.83□□□□□ -1.8
CLK1-204ENST00000432425 B3GNT3Q9Y2A9 372 aa3.83□□□□□ -1.8
CLK1-204ENST00000432425 ZNF814B7Z6K7 855 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 PLA2G6O60733 806 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 RFPL3SP0C7P2 107 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 ABCB4P21439 1286 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 AKT1P31749 480 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 CIITAP33076 1130 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 SLC37A1P57057 533 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 TBX4P57082 545 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 BTKQ06187 659 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 RAPGEF1Q13905 1077 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 GRM4Q14833 912 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 INPP5JQ15735 1006 aaPredicted RBP3.82□□□□□ -1.8
CLK1-204ENST00000432425 PRTGQ2VWP7 1150 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 LVRNQ6Q4G3 990 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 ZNF474Q6S9Z5 364 aaPredicted RBP3.82□□□□□ -1.8
CLK1-204ENST00000432425 LRIG3Q6UXM1 1119 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 RFX8Q6ZV50 586 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 SYTL1Q8IYJ3 562 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 FAM186BQ8IYM0 893 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 PRPF18Q99633 342 aaKnown RBP3.82□□□□□ -1.8
CLK1-204ENST00000432425 THSD1Q9NS62 852 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 SLC52A1Q9NWF4 448 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 MSRB1Q9NZV6 116 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 ANAPC4Q9UJX5 808 aa3.82□□□□□ -1.8
CLK1-204ENST00000432425 CKAP5Q14008 2032 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 KIR2DS5A0A0G2JLQ3 304 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 KIR2DS3K7RE56 304 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 PIP5K1BO14986 540 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 NKX2-8O15522 239 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 PPP6R2O75170 966 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 CNTN5O94779 1100 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 NDUFB8O95169 186 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 CER1O95813 267 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TOMM40O96008 361 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 ALDOAP04075 364 aaKnown RBP3.81□□□□□ -1.8
CLK1-204ENST00000432425 NPPBP16860 134 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TGM2P21980 687 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 STARD3Q14849 445 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 PGM5Q15124 567 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 AAK1Q2M2I8 961 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 ISM2Q6H9L7 571 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 RINT1Q6NUQ1 792 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 SLC39A5Q6ZMH5 540 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 B4GALNT4Q76KP1 1039 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TRABD2AQ86V40 505 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 GATAD2AQ86YP4 633 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 C18orf8Q96DM3 657 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 REXO5Q96IC2 774 aaKnown RBP3.81□□□□□ -1.8
CLK1-204ENST00000432425 SGCZQ96LD1 299 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 AAMDCQ9H7C9 122 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 ARFGAP3Q9NP61 516 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 UTS2RQ9UKP6 389 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 NFU1Q9UMS0 254 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TMEM272A0A1B0GTI8 110 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 HOXB6P17509 224 aaKnown RBP3.81□□□□□ -1.8
CLK1-204ENST00000432425 TNFRSF1BP20333 461 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TKTP29401 623 aaKnown RBP3.81□□□□□ -1.8
CLK1-204ENST00000432425 TECP42680 631 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 SMTNL2Q2TAL5 461 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 DGKKQ5KSL6 1271 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TMEM88Q6PEY1 159 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 TRAPPC11Q7Z392 1133 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 NRSN1Q8IZ57 195 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 OR52N4Q8NGI2 321 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 SFXN1Q9H9B4 322 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 NLRC4Q9NPP4 1024 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 PCDHA12Q9UN75 941 aa3.81□□□□□ -1.8
CLK1-204ENST00000432425 LOC105369274A0A096LPK9 316 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 LOC102723532A0A0G2JNH3 316 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 A0A1W2PPC1 479 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 C3orf70A6NLC5 250 aaPredicted RBP3.8□□□□□ -1.8
CLK1-204ENST00000432425 RHODO00212 210 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 PLIN1O60240 522 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 RPP40O75818 363 aaKnown RBP3.8□□□□□ -1.8
CLK1-204ENST00000432425 EPN2O95208 641 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 KAT7O95251 611 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 NFATC1O95644 943 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 TBXAS1P24557 533 aaPredicted RBP3.8□□□□□ -1.8
CLK1-204ENST00000432425 KLRK1P26718 216 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 GRK5P34947 590 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 TAS2R50P59544 299 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 TLE3Q04726 772 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 GAD2Q05329 585 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 C6orf10Q5SRN2 563 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 ZNF549Q6P9A3 640 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 C9orf47Q6ZRZ4 202 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 CYB5R4Q7L1T6 521 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 DDIASQ8IXT1 998 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 OR4N4Q8N0Y3 316 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 TMEM199Q8N511 208 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 CENPIQ92674 756 aaPredicted RBP3.8□□□□□ -1.8
CLK1-204ENST00000432425 MCRS1Q96EZ8 462 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 CCDC134Q9H6E4 229 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 FNIP2Q9P278 1114 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 IGSF9Q9P2J2 1179 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 RAB21Q9UL25 225 aa3.8□□□□□ -1.8
CLK1-204ENST00000432425 MAGED2Q9UNF1 606 aaPredicted RBP3.8□□□□□ -1.8
CLK1-204ENST00000432425 EVPLQ92817 2033 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms