RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 ABCC13Q9NSE7 274 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 TMEM51Q9NW97 253 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 CACNA2D2Q9NY47 1150 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 NCKAP1Q9Y2A7 1128 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 COQ4Q9Y3A0 265 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 BPTFQ12830 3046 aa8.66□□□□□ -1.02
CDH13-203ENST00000431540 ATXN2Q99700 1313 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 TARSL2A2RTX5 802 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 KCNJ18B7U540 433 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 C10orf142B7Z368 130 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 WASH3PC4AMC7 463 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 VILLO15195 856 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 PMM2O15305 246 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 CYP26A1O43174 497 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ZBED1O96006 694 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ASLP04424 464 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 EPHX1P07099 455 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 DLDP09622 509 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 CORO1AP31146 461 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 PIK3CAP42336 1068 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 WASP42768 502 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ME1P48163 572 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 CASP4P49662 377 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 PGFP49763 221 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 BCAT1P54687 386 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 YWHAGP61981 247 aaKnown RBP eCLIP8.65□□□□□ -1.02
CDH13-203ENST00000431540 RACK1P63244 317 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 DLG4P78352 724 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 MTA1Q13330 715 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 STILQ15468 1287 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 GEN1Q17RS7 908 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 TTC31Q49AM3 519 aaPredicted RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 C1orf220Q5T0J3 134 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 PPP1R26Q5T8A7 1209 aaPredicted RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 SERPINA13PQ6UXR4 307 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 BEND5Q7L4P6 421 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 PDZD3Q86UT5 571 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 KIAA0895Q8NCT3 520 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 FBXL13Q8NEE6 735 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 SETD7Q8WTS6 366 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 IRGQQ8WZA9 623 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 TTC17Q96AE7 1141 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 PAGE5Q96GU1 130 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 PPP1R9BQ96SB3 815 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 KDM4CQ9H3R0 1056 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ERVMER34-1Q9H9K5 563 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 CNGB3Q9NQW8 809 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ADAMTS1Q9UHI8 967 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 FZD4Q9ULV1 537 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ANKRD6Q9Y2G4 727 aa8.65□□□□□ -1.02
CDH13-203ENST00000431540 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.65□□□□□ -1.02
CDH13-203ENST00000431540 HELZ2Q9BYK8 2649 aaKnown RBP8.65□□□□□ -1.03
CDH13-203ENST00000431540 MUC22E2RYF6 1773 aaPredicted RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 SCAMP3O14828 347 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 XPO1O14980 1071 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 MAGEC1O60732 1142 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 RNASEH1O60930 286 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 DNTTP04053 509 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 SRPRAP08240 638 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 ZSCAN22P10073 491 aaPredicted RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 MAOBP27338 520 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 ADORA2BP29275 332 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 AFMP43652 599 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 CCT8P50990 548 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 CCR5P51681 352 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 OVGP1Q12889 678 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 NNTQ13423 1086 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 ADAM9Q13443 819 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 SLC12A1Q13621 1099 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 MSS51Q4VC12 460 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 SOWAHCQ53LP3 525 aaPredicted RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 COBLL1Q53SF7 1204 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 NUGGCQ68CJ6 796 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 MSANTD2Q6P1R3 559 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 RSRC2Q7L4I2 434 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 GPRIN1Q7Z2K8 1008 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 PIGZQ86VD9 579 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 DENND1CQ8IV53 801 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 OXR1Q8N573 874 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 DEFB119Q8N690 84 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 FIBINQ8TAL6 211 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 TRIM62Q9BVG3 475 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 SRRTQ9BXP5 876 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 NRSN2Q9GZP1 204 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 RSPH9Q9H1X1 276 aaPredicted RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 LHX5Q9H2C1 402 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 BLZF1Q9H2G9 400 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 ZDHHC4Q9NPG8 344 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 FAM49BQ9NUQ9 324 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 RAB20Q9NX57 234 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 HESX1Q9UBX0 185 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 EIF2B4Q9UI10 523 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 HPSEQ9Y251 543 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 RAD54BQ9Y620 910 aa8.64□□□□□ -1.03
CDH13-203ENST00000431540 GCN1Q92616 2671 aaKnown RBP8.64□□□□□ -1.03
CDH13-203ENST00000431540 DOCK9Q9BZ29 2069 aa8.63□□□□□ -1.03
CDH13-203ENST00000431540 A0A1W2PPC4 97 aa8.63□□□□□ -1.03
CDH13-203ENST00000431540 TRABD2BA6NFA1 517 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms