RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 PRAMEF17Q5VTA0 474 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 ARL6IP4Q66PJ3 421 aaKnown RBP3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 ZNF425Q6IV72 752 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 PDXDC1Q6P996 788 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 CLEC9AQ6UXN8 241 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 SERPINA13PQ6UXR4 307 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 FSTL5Q8N475 847 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 GALNT4Q8N4A0 578 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 CEP70Q8NHQ1 597 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 ABHD5Q8WTS1 349 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 WASF1Q92558 559 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 GPR63Q9BZJ6 419 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 SEMA4CQ9C0C4 833 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 TWSG1Q9GZX9 223 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 VPS16Q9H269 839 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 PLEKHA5Q9HAU0 1116 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 SEPSECSQ9HD40 501 aaKnown RBP3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 FLRT1Q9NZU1 646 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 KCND3Q9UK17 655 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 ASAP1Q9ULH1 1129 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 AFG3L2Q9Y4W6 797 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 ITIH6Q6UXX5 1313 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 COL15A1P39059 1388 aa3.33□□□□□ -1.88
HMGB1P9-201ENST00000429856 MANSC4A6NHS7 340 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 POC1B-GALNT4F8VUJ3 575 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 J3KTA2 159 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 SMIM22K7EJ46 135 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 KCNAB3O43448 404 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 SPRY2O43597 315 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 AHCYL1O43865 530 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 USO1O60763 962 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 KRT38O76015 456 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 WDR47O94967 919 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 PDE8BO95263 885 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 NTSR2O95665 410 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ANXA6P08133 673 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 TMEM225BP0DP42 221 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 FPR3P25089 353 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 CERS1P27544 350 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 PAPOLAP51003 745 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 DGKQP52824 942 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ACTR2P61160 394 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 TXNL4AP83876 142 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 PSG6Q00889 435 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 TFF2Q03403 129 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 UBE3AQ05086 875 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 CHRNDQ07001 517 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 NSUN2Q08J23 767 aaKnown RBP eCLIP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 LMAN2Q12907 356 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 EFR3AQ14156 821 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 KRT32Q14532 448 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 TSTQ16762 297 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 GALNTL6Q49A17 601 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 RNASE12Q5GAN4 147 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 TTC22Q5TAA0 569 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ANKRD45Q5TZF3 282 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ARMC3Q5W041 872 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 FAM205BPQ63HN1 556 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ABLIM2Q6H8Q1 611 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 BBS12Q6ZW61 710 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 FASTKD5Q7L8L6 764 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 OR8H2Q8N162 312 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 PNPLA1Q8N8W4 532 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ST8SIA4Q92187 359 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 HVCN1Q96D96 273 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 WDYHV1Q96HA8 205 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 CCDC17Q96LX7 622 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 TRAPPC9Q96Q05 1148 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ASB2Q96Q27 587 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 MMS19Q96T76 1030 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 MECRQ9BV79 373 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 PAIP1Q9H074 479 aaKnown RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 PRKRIP1Q9H875 184 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 SLC13A4Q9UKG4 626 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 MAFFQ9ULX9 164 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 ARHGAP26Q9UNA1 814 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 CNPY2Q9Y2B0 182 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 SLC27A6Q9Y2P4 619 aa3.32□□□□□ -1.88
HMGB1P9-201ENST00000429856 FER1L4A9Z1Z3 1794 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 WDR91A4D1P6 747 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 OR2W5A6NFC9 320 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 PGPEP1LA6NFU8 196 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 FAM90A20PA6NIJ5 464 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 STX16-NPEPL1H3BU86 382 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 STX16O14662 325 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 TAF5LO75529 589 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 GCATO75600 419 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 RPP40O75818 363 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 MT-CO3P00414 261 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 HSP90AA1P07900 732 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 SRGAP2BP0DMP2 458 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 XBP1P17861 261 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 MAPK4P31152 587 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 HTR7P34969 479 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 DIO1P49895 249 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CCT4P50991 539 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 ALDH18A1P54886 795 aaKnown RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CASP6P55212 293 aa3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 SETQ01105 290 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P9-201ENST00000429856 CFHR3Q02985 330 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms