RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 OPRL1P41146 370 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CDH15P55291 814 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 EIF3EP60228 445 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 OTUD4Q01804 1114 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CETN1Q12798 172 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TARDBPQ13148 414 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TRPC3Q13507 836 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 SEC23AQ15436 765 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 EFHC2Q5JST6 749 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CLVS2Q5SYC1 327 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 GADL1Q6ZQY3 521 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 MFSD6Q6ZSS7 791 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 KIAA0408Q6ZU52 694 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TMEM26Q6ZUK4 368 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 DSG4Q86SJ6 1040 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZC3H7AQ8IWR0 971 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 DTX3Q8N9I9 347 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TTLQ8NG68 377 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 LNX1Q8TBB1 728 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CMTM5Q96DZ9 223 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CEP170P1Q96L14 293 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TMEM79Q9BSE2 394 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 STN1Q9H668 368 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 NOL6Q9H6R4 1146 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZNF277Q9NRM2 450 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 PSME2Q9UL46 239 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 WBP11Q9Y2W2 641 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 V9GY48 417 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 IGSF9BQ9UPX0 1349 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 C7orf72A4D263 438 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 SMCO2A6NFE2 343 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 A8MX80 341 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 SNPHO15079 494 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 DEAF1O75398 565 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 PRDM1O75626 825 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ITGAXP20702 1163 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 LEPRP48357 1165 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ALDH18A1P54886 795 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 KCNH2Q12809 1159 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 PMS2P3Q13401 168 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 MTMR2Q13614 643 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZYXQ15942 572 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 LEXMQ3ZCV2 418 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 AASDHQ4L235 1098 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TCHHL1Q5QJ38 904 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CYP4F22Q6NT55 531 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 FKBP9P1Q75LS8 142 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 AMIGO3Q86WK7 504 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 LILRA2Q8N149 483 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 TMEM102Q8N9M5 508 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ABHD11Q8NFV4 315 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 OLIG1Q8TAK6 271 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 CD101Q93033 1021 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 OMA1Q96E52 524 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 ZNF560Q96MR9 790 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 FERD3LQ96RJ6 166 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 PLIN2Q99541 437 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 DPEP3Q9H4B8 488 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 IFT22Q9H7X7 185 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 KCND2Q9NZV8 630 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 PRPF19Q9UMS4 504 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 MINPP1Q9UNW1 487 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 BTAF1O14981 1849 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 NFASCO94856 1347 aa9.09□□□□□ -0.95
CDC42BPA-206ENST00000429440 PNMA6FA0A0J9YX94 578 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ISPDA4D126 451 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 H3BUI4 141 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ACSL4O60488 711 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SORBS2O94875 1100 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CSPG5O95196 566 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ATF6P18850 670 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 BGNP21810 368 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CYP7A1P22680 504 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 WEE1P30291 646 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 POLD2P49005 469 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 HCAR3P49019 387 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ETV1P50549 477 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 BLVRAP53004 296 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 EVX2Q03828 476 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 FAAP100Q0VG06 881 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 IKBKEQ14164 716 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 GALNT3Q14435 633 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 MGAT5BQ3V5L5 792 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 IQSEC1Q6DN90 963 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ERAP2Q6P179 960 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ADGRD1Q6QNK2 874 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZNF600Q6ZNG1 722 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SV2BQ7L1I2 683 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 KSR1Q8IVT5 923 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 ZC3H3Q8IXZ2 948 aaKnown RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 DEFB107AQ8IZN7 70 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 SNX31Q8N9S9 440 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 MZB1Q8WU39 189 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 RAB2BQ8WUD1 216 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 JPH3Q8WXH2 748 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 JDP2Q8WYK2 163 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 FIG4Q92562 907 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 CEP95Q96GE4 821 aa9.08□□□□□ -0.96
CDC42BPA-206ENST00000429440 APOPT1Q96IL0 206 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms